Experiment: Def sodium fluoride 25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2358 and Psest_2359 overlap by 4 nucleotides Psest_2359 and Psest_2360 overlap by 4 nucleotides Psest_2360 and Psest_2361 overlap by 4 nucleotides Psest_2361 and Psest_2362 overlap by 4 nucleotides
Psest_2358: Psest_2358 - Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 2,513,291 to 2,514,049
_2358
Psest_2359: Psest_2359 - Predicted permeases, at 2,514,046 to 2,514,930
_2359
Psest_2360: Psest_2360 - Uncharacterized protein, putative amidase, at 2,514,927 to 2,515,688
_2360
Psest_2361: Psest_2361 - Amidases related to nicotinamidase, at 2,515,685 to 2,516,341
_2361
Psest_2362: Psest_2362 - Zn-dependent hydrolases, including glyoxylases, at 2,516,338 to 2,517,120
_2362
Position (kb)
2514
2515
2516 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2513.996 kb on + strand at 2513.996 kb on + strand at 2513.996 kb on + strand at 2513.996 kb on + strand at 2513.997 kb on - strand at 2514.169 kb on + strand, within Psest_2359 at 2514.169 kb on + strand, within Psest_2359 at 2514.170 kb on - strand, within Psest_2359 at 2514.337 kb on + strand, within Psest_2359 at 2514.337 kb on + strand, within Psest_2359 at 2514.338 kb on - strand, within Psest_2359 at 2514.338 kb on - strand, within Psest_2359 at 2514.338 kb on - strand, within Psest_2359 at 2515.278 kb on + strand, within Psest_2360 at 2515.548 kb on + strand, within Psest_2360 at 2515.548 kb on + strand, within Psest_2360 at 2515.549 kb on - strand, within Psest_2360 at 2515.549 kb on - strand, within Psest_2360 at 2515.549 kb on - strand, within Psest_2360 at 2515.549 kb on - strand, within Psest_2360 at 2515.549 kb on - strand, within Psest_2360 at 2515.549 kb on - strand, within Psest_2360 at 2515.549 kb on - strand, within Psest_2360 at 2515.549 kb on - strand, within Psest_2360 at 2515.549 kb on - strand, within Psest_2360 at 2515.834 kb on - strand, within Psest_2361 at 2516.387 kb on - strand at 2516.404 kb on - strand at 2516.504 kb on - strand, within Psest_2362 at 2516.639 kb on + strand, within Psest_2362 at 2516.639 kb on + strand, within Psest_2362 at 2516.639 kb on + strand, within Psest_2362 at 2516.639 kb on + strand, within Psest_2362 at 2516.639 kb on + strand, within Psest_2362 at 2516.639 kb on + strand, within Psest_2362 at 2516.639 kb on + strand, within Psest_2362 at 2516.639 kb on + strand, within Psest_2362 at 2516.639 kb on + strand, within Psest_2362 at 2516.639 kb on + strand, within Psest_2362 at 2516.639 kb on + strand, within Psest_2362 at 2516.639 kb on + strand, within Psest_2362 at 2516.639 kb on + strand, within Psest_2362 at 2516.639 kb on + strand, within Psest_2362 at 2516.639 kb on + strand, within Psest_2362 at 2516.640 kb on - strand, within Psest_2362 at 2516.640 kb on - strand, within Psest_2362 at 2516.640 kb on - strand, within Psest_2362 at 2516.640 kb on - strand, within Psest_2362 at 2516.640 kb on - strand, within Psest_2362 at 2516.640 kb on - strand, within Psest_2362 at 2516.640 kb on - strand, within Psest_2362
Per-strain Table
Position Strand Gene LocusTag Fraction Def sodium fluoride 25 mM remove 2,513,996 + -1.1 2,513,996 + -0.9 2,513,996 + +0.7 2,513,996 + -1.1 2,513,997 - -0.6 2,514,169 + Psest_2359 0.14 -0.7 2,514,169 + Psest_2359 0.14 +0.3 2,514,170 - Psest_2359 0.14 +0.2 2,514,337 + Psest_2359 0.33 -0.3 2,514,337 + Psest_2359 0.33 +1.1 2,514,338 - Psest_2359 0.33 +0.7 2,514,338 - Psest_2359 0.33 +0.6 2,514,338 - Psest_2359 0.33 +0.7 2,515,278 + Psest_2360 0.46 +0.4 2,515,548 + Psest_2360 0.81 +0.3 2,515,548 + Psest_2360 0.81 +1.3 2,515,549 - Psest_2360 0.82 +1.5 2,515,549 - Psest_2360 0.82 -2.1 2,515,549 - Psest_2360 0.82 +0.5 2,515,549 - Psest_2360 0.82 +0.7 2,515,549 - Psest_2360 0.82 +0.7 2,515,549 - Psest_2360 0.82 +0.7 2,515,549 - Psest_2360 0.82 +0.7 2,515,549 - Psest_2360 0.82 -0.6 2,515,549 - Psest_2360 0.82 +1.3 2,515,834 - Psest_2361 0.23 -1.6 2,516,387 - +1.1 2,516,404 - -0.3 2,516,504 - Psest_2362 0.21 +0.7 2,516,639 + Psest_2362 0.38 -1.3 2,516,639 + Psest_2362 0.38 +1.4 2,516,639 + Psest_2362 0.38 -0.9 2,516,639 + Psest_2362 0.38 -0.6 2,516,639 + Psest_2362 0.38 -0.1 2,516,639 + Psest_2362 0.38 -0.4 2,516,639 + Psest_2362 0.38 -0.9 2,516,639 + Psest_2362 0.38 -0.3 2,516,639 + Psest_2362 0.38 -0.8 2,516,639 + Psest_2362 0.38 +0.5 2,516,639 + Psest_2362 0.38 -2.7 2,516,639 + Psest_2362 0.38 -0.2 2,516,639 + Psest_2362 0.38 -2.1 2,516,639 + Psest_2362 0.38 -1.9 2,516,639 + Psest_2362 0.38 +0.1 2,516,640 - Psest_2362 0.39 +0.7 2,516,640 - Psest_2362 0.39 +0.1 2,516,640 - Psest_2362 0.39 -0.1 2,516,640 - Psest_2362 0.39 +0.4 2,516,640 - Psest_2362 0.39 +0.7 2,516,640 - Psest_2362 0.39 +0.7 2,516,640 - Psest_2362 0.39 +1.9
Or see this region's nucleotide sequence