Experiment: L-Glutamic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SO0119 and SO0120 are separated by 17 nucleotides SO0120 and SO0121 are separated by 298 nucleotides SO0121 and SO0122 overlap by 4 nucleotides SO0122 and SO0123 are separated by 26 nucleotides
SO0119: SO0119 - conserved hypothetical protein (NCBI ptt file), at 129,240 to 129,632
SO0119
SO0120: SO0120 - hypothetical protein (NCBI ptt file), at 129,650 to 130,228
SO0120
SO0121: SO0121 - hypothetical Small-conductance mechanosensitive channel (NCBI ptt file), at 130,527 to 131,705
SO0121
SO0122: SO0122 - transporter, LysE family (NCBI ptt file), at 131,702 to 132,325
SO0122
SO0123: SO0123 - acyltransferase family protein (NCBI ptt file), at 132,352 to 132,912
SO0123
Position (kb) 130
131
132 Strain fitness (log2 ratio) -2
-1
0
1 at 129.539 kb on + strand, within SO0119 at 129.587 kb on + strand, within SO0119 at 129.780 kb on + strand, within SO0120 at 129.842 kb on - strand, within SO0120 at 129.877 kb on - strand, within SO0120 at 129.895 kb on - strand, within SO0120 at 129.907 kb on + strand, within SO0120 at 130.054 kb on - strand, within SO0120 at 130.095 kb on + strand, within SO0120 at 130.103 kb on - strand, within SO0120 at 130.145 kb on + strand, within SO0120 at 130.151 kb on - strand, within SO0120 at 130.180 kb on - strand at 130.387 kb on + strand at 130.530 kb on - strand at 130.620 kb on + strand at 130.623 kb on - strand at 130.624 kb on - strand at 130.624 kb on - strand at 130.626 kb on - strand at 130.788 kb on - strand, within SO0121 at 130.795 kb on - strand, within SO0121 at 130.870 kb on + strand, within SO0121 at 130.871 kb on - strand, within SO0121 at 130.917 kb on - strand, within SO0121 at 130.947 kb on + strand, within SO0121 at 130.947 kb on + strand, within SO0121 at 131.128 kb on - strand, within SO0121 at 131.128 kb on - strand, within SO0121 at 131.141 kb on - strand, within SO0121 at 131.158 kb on - strand, within SO0121 at 131.333 kb on + strand, within SO0121 at 131.423 kb on + strand, within SO0121 at 131.484 kb on + strand, within SO0121 at 131.499 kb on - strand, within SO0121 at 131.506 kb on + strand, within SO0121 at 131.534 kb on - strand, within SO0121 at 131.644 kb on + strand at 131.701 kb on - strand at 131.707 kb on - strand at 131.714 kb on + strand at 131.766 kb on - strand, within SO0122 at 131.830 kb on + strand, within SO0122 at 131.837 kb on + strand, within SO0122 at 131.845 kb on - strand, within SO0122 at 131.866 kb on - strand, within SO0122 at 131.871 kb on - strand, within SO0122 at 131.918 kb on + strand, within SO0122 at 131.942 kb on + strand, within SO0122 at 131.942 kb on + strand, within SO0122 at 131.950 kb on - strand, within SO0122 at 132.022 kb on + strand, within SO0122 at 132.030 kb on - strand, within SO0122 at 132.121 kb on - strand, within SO0122 at 132.173 kb on - strand, within SO0122 at 132.194 kb on - strand, within SO0122 at 132.234 kb on - strand, within SO0122 at 132.402 kb on + strand at 132.410 kb on - strand, within SO0123 at 132.410 kb on - strand, within SO0123 at 132.410 kb on - strand, within SO0123 at 132.410 kb on - strand, within SO0123 at 132.460 kb on + strand, within SO0123 at 132.468 kb on - strand, within SO0123 at 132.518 kb on + strand, within SO0123 at 132.526 kb on - strand, within SO0123
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N) remove 129,539 + SO0119 0.76 +0.6 129,587 + SO0119 0.88 -0.7 129,780 + SO0120 0.22 -0.3 129,842 - SO0120 0.33 +1.1 129,877 - SO0120 0.39 +0.4 129,895 - SO0120 0.42 -0.2 129,907 + SO0120 0.44 +0.0 130,054 - SO0120 0.70 +0.1 130,095 + SO0120 0.77 +0.3 130,103 - SO0120 0.78 +0.4 130,145 + SO0120 0.85 -0.3 130,151 - SO0120 0.87 +0.4 130,180 - -0.8 130,387 + -0.0 130,530 - +0.1 130,620 + +0.8 130,623 - +0.2 130,624 - -0.1 130,624 - -0.1 130,626 - -0.4 130,788 - SO0121 0.22 -0.7 130,795 - SO0121 0.23 -0.8 130,870 + SO0121 0.29 -0.2 130,871 - SO0121 0.29 -0.7 130,917 - SO0121 0.33 +0.8 130,947 + SO0121 0.36 -0.2 130,947 + SO0121 0.36 +0.6 131,128 - SO0121 0.51 -0.1 131,128 - SO0121 0.51 -0.6 131,141 - SO0121 0.52 -0.7 131,158 - SO0121 0.54 +0.2 131,333 + SO0121 0.68 +0.0 131,423 + SO0121 0.76 +0.2 131,484 + SO0121 0.81 +0.2 131,499 - SO0121 0.82 -1.0 131,506 + SO0121 0.83 -1.5 131,534 - SO0121 0.85 -1.5 131,644 + -1.0 131,701 - +0.3 131,707 - -0.3 131,714 + -0.1 131,766 - SO0122 0.10 +0.4 131,830 + SO0122 0.21 +0.5 131,837 + SO0122 0.22 +1.0 131,845 - SO0122 0.23 -0.2 131,866 - SO0122 0.26 +0.9 131,871 - SO0122 0.27 +0.3 131,918 + SO0122 0.35 -1.0 131,942 + SO0122 0.38 +0.0 131,942 + SO0122 0.38 +0.1 131,950 - SO0122 0.40 -2.0 132,022 + SO0122 0.51 -0.2 132,030 - SO0122 0.53 -0.8 132,121 - SO0122 0.67 -0.0 132,173 - SO0122 0.75 -0.1 132,194 - SO0122 0.79 +0.9 132,234 - SO0122 0.85 -1.2 132,402 + -0.5 132,410 - SO0123 0.10 -0.6 132,410 - SO0123 0.10 +0.4 132,410 - SO0123 0.10 +0.1 132,410 - SO0123 0.10 -0.8 132,460 + SO0123 0.19 -1.1 132,468 - SO0123 0.21 -1.0 132,518 + SO0123 0.30 -0.5 132,526 - SO0123 0.31 -0.3
Or see this region's nucleotide sequence