Strain Fitness in Shewanella oneidensis MR-1 around SO3582

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,747,875	+		SO3581	0.42	+0.2
3,748,103	+				-0.7
3,748,174	+	tRNA-Leu-5	SO_t092	0.34	-0.7
3,748,360	+				+0.1
3,748,368	-				-0.8
3,748,462	+				+0.5
3,748,483	+				-0.1
3,748,483	+				-1.8
3,748,491	-				+1.1
3,748,495	+				-0.3
3,748,572	+				-0.9
3,748,572	+				+0.0
3,748,580	-				+0.9
3,748,580	-				-0.6
3,748,629	-				+0.2
3,748,636	-				-0.3
3,748,641	-				+0.5
3,748,750	+		SO3582	0.14	-0.7
3,748,751	-		SO3582	0.14	-0.2
3,748,762	+		SO3582	0.15	+1.1
3,748,830	-		SO3582	0.19	-0.0
3,748,830	-		SO3582	0.19	+0.6
3,748,988	-		SO3582	0.29	+0.4
3,749,005	+		SO3582	0.30	+0.9
3,749,005	+		SO3582	0.30	-0.4
3,749,040	+		SO3582	0.32	+0.2
3,749,075	-		SO3582	0.34	+1.0
3,749,075	-		SO3582	0.34	+1.0
3,749,098	+		SO3582	0.35	+1.2
3,749,143	+		SO3582	0.38	+0.0
3,749,145	+		SO3582	0.38	-0.5
3,749,153	-		SO3582	0.39	-0.3
3,749,173	+		SO3582	0.40	+0.2
3,749,181	-		SO3582	0.41	+0.3
3,749,236	+		SO3582	0.44	+0.2
3,749,244	-		SO3582	0.44	+0.6
3,749,261	+		SO3582	0.46	+0.1
3,749,284	+		SO3582	0.47	-0.4
3,749,284	-		SO3582	0.47	+0.6
3,749,345	-		SO3582	0.51	+0.4
3,749,363	-		SO3582	0.52	+0.8
3,749,368	-		SO3582	0.52	+0.1
3,749,405	+		SO3582	0.54	+0.2
3,749,509	-		SO3582	0.61	+0.7
3,749,512	+		SO3582	0.61	+0.3
3,749,568	-		SO3582	0.64	-0.1
3,749,707	-		SO3582	0.73	+0.6
3,749,756	+		SO3582	0.76	+0.2
3,749,888	+		SO3582	0.84	+0.0
3,749,896	-		SO3582	0.85	+0.2
3,749,896	-		SO3582	0.85	+0.4
3,749,954	+		SO3582	0.88	-0.5
3,750,078	-				+1.0
3,750,104	+				-0.3
3,750,104	+				-0.4
3,750,284	+				+0.8
3,750,303	-				-0.1
3,750,314	-				+0.8
3,750,324	+		SO_3583	0.10	+0.4
3,750,465	+		SO_3583	0.30	+0.0
3,750,594	+		SO_3583	0.48	-0.6
3,750,602	-		SO_3583	0.49	-2.6
3,750,602	-		SO_3583	0.49	+0.2
3,750,602	-		SO_3583	0.49	+0.3
3,750,607	-		SO_3583	0.50	-0.8
3,750,640	+		SO_3583	0.55	-0.2
3,750,659	+		SO_3583	0.57	+0.1
3,750,939	-				+0.3
3,751,041	-				-2.6
3,751,100	-		SO3584	0.19	-2.0
3,751,132	+		SO3584	0.24	-0.7