Strain Fitness in Shewanella oneidensis MR-1 around SO4323

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,508,923	-		SO4321	0.60	-0.0
4,508,990	+		SO4321	0.71	-0.5
4,509,014	+		SO4321	0.75	-0.5
4,509,020	+		SO4321	0.76	+0.4
4,509,022	-		SO4321	0.77	-0.8
4,509,034	-		SO4321	0.79	+0.8
4,509,044	-		SO4321	0.80	+1.1
4,509,078	+		SO4321	0.86	-0.0
4,509,079	+		SO4321	0.86	+0.7
4,509,087	-		SO4321	0.87	-0.2
4,509,097	+		SO4321	0.89	-0.1
4,509,098	-		SO4321	0.89	-0.1
4,509,165	+				+0.8
4,509,262	-		SO4322	0.11	-0.2
4,509,264	+		SO4322	0.12	-0.5
4,509,344	+		SO4322	0.23	-0.5
4,509,363	+		SO4322	0.26	-0.2
4,509,481	+		SO4322	0.42	+0.4
4,509,489	-		SO4322	0.43	-0.3
4,509,489	-		SO4322	0.43	+0.7
4,509,558	-		SO4322	0.53	-0.0
4,509,562	+		SO4322	0.54	+0.8
4,509,637	+		SO4322	0.64	-0.5
4,509,766	-		SO4322	0.82	+0.3
4,509,836	+				-0.5
4,509,838	-				+0.0
4,509,843	+				+2.0
4,509,843	+				+0.6
4,509,843	+				-0.0
4,509,843	+				+0.2
4,509,844	-				+0.1
4,509,866	-				-0.4
4,509,866	-				+0.3
4,509,866	-				+1.0
4,509,896	+				+0.7
4,509,904	-				-1.2
4,509,939	+				+0.2
4,509,958	+				-0.6
4,509,959	+				-0.2
4,509,959	+				+0.2
4,509,966	-				-0.3
4,509,993	-				-0.2
4,510,018	+				+0.1
4,510,026	-				+0.6
4,510,026	-				-0.4
4,510,054	-				-0.0
4,510,098	-		SO4323	0.10	+0.5
4,510,265	+		SO4323	0.19	+0.6
4,510,274	+		SO4323	0.20	+0.1
4,510,502	-		SO4323	0.31	-0.7
4,510,761	-		SO4323	0.45	+0.5
4,510,886	-		SO4323	0.51	+0.3
4,510,912	-		SO4323	0.53	+0.7
4,510,932	+		SO4323	0.54	+0.3
4,510,973	+		SO4323	0.56	+0.3
4,510,975	+		SO4323	0.56	+0.1
4,511,131	-		SO4323	0.64	+0.3
4,511,242	-		SO4323	0.70	+0.2
4,511,267	-		SO4323	0.71	-0.2
4,511,278	-		SO4323	0.72	+0.4
4,511,537	-		SO4323	0.85	-0.8
4,511,537	-		SO4323	0.85	-1.8
4,511,597	+		SO4323	0.88	+0.7
4,511,597	+		SO4323	0.88	+0.6
4,511,602	+		SO4323	0.89	+0.6
4,511,612	+		SO4323	0.89	+1.3
4,511,644	+				+0.6
4,511,678	-				+0.5
4,511,727	-				+0.4
4,511,771	-				+0.0
4,511,863	-				+0.3
4,511,910	+				-0.4
4,512,089	+				+0.8
4,512,146	-	tRNA-Pro-2	SO_t098	0.18	-1.5
4,512,606	+				-0.6
4,512,611	+				+0.3
4,512,619	-				+0.1
4,512,630	+				-0.5
4,512,790	+				-0.2
4,512,790	+				-0.3