Strain Fitness in Shewanella oneidensis MR-1 around SO3410

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,546,413	-		SO3408	0.17	-0.6
3,546,421	-		SO3408	0.19	+0.2
3,546,457	-		SO3408	0.29	+0.0
3,546,673	-				+0.7
3,546,673	-				+0.5
3,546,778	-				-0.7
3,546,793	+				+0.0
3,546,795	+				-0.8
3,546,798	-				-0.4
3,546,816	-				-0.4
3,546,857	-				-0.5
3,546,898	-		SO3409	0.18	+0.3
3,546,916	+		SO3409	0.22	+0.2
3,546,945	-		SO3409	0.29	+0.4
3,546,989	-		SO3409	0.39	+0.9
3,547,006	+		SO3409	0.42	+0.2
3,547,038	-		SO3409	0.50	+0.3
3,547,048	+		SO3409	0.52	+0.4
3,547,056	-		SO3409	0.54	-0.8
3,547,096	-		SO3409	0.63	+0.0
3,547,277	+				+0.2
3,547,298	+				-0.1
3,547,335	+				-0.3
3,547,513	-		SO3410	0.27	+0.4
3,547,524	+		SO3410	0.29	+0.2
3,547,770	+		SO3410	0.86	-0.8
3,547,770	+		SO3410	0.86	+0.1
3,547,778	-		SO3410	0.88	+1.0
3,547,778	-		SO3410	0.88	+0.5
3,547,840	+				-0.6
3,547,850	+				+0.2
3,547,878	+				-0.1
3,547,886	-				+0.3
3,547,886	-				-0.1
3,547,886	-				-0.1
3,547,954	+				-0.6
3,547,962	-				+0.7
3,547,968	-				-1.4
3,548,268	-		SO3411	0.10	-0.3
3,548,268	-		SO3411	0.10	+0.2
3,548,268	-		SO3411	0.10	+0.0
3,548,306	-		SO3411	0.11	+0.3
3,548,386	+		SO3411	0.14	-0.4
3,548,450	-		SO3411	0.16	+0.1
3,548,507	+		SO3411	0.18	+0.3
3,548,513	-		SO3411	0.18	+0.2
3,548,556	+		SO3411	0.19	+0.3
3,548,635	-		SO3411	0.21	+0.1
3,548,669	-		SO3411	0.22	+0.7
3,548,695	+		SO3411	0.23	-0.1
3,548,742	+		SO3411	0.25	-0.5
3,548,742	+		SO3411	0.25	+0.3
3,548,805	+		SO3411	0.27	-0.2
3,548,805	+		SO3411	0.27	+0.4
3,548,805	+		SO3411	0.27	-0.3
3,548,805	+		SO3411	0.27	-0.2
3,548,805	+		SO3411	0.27	+0.7
3,548,805	+		SO3411	0.27	+0.3
3,548,813	-		SO3411	0.27	-0.9
3,548,813	-		SO3411	0.27	+0.6
3,548,813	-		SO3411	0.27	-0.1