Strain Fitness in Shewanella oneidensis MR-1 around SO3328

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,476,020	+				+0.1
3,476,020	+				+0.3
3,476,020	+				-0.7
3,476,028	-				+0.6
3,476,028	-				-1.3
3,476,091	+		SO3325	0.16	-1.1
3,476,245	+		SO3325	0.66	-0.2
3,476,310	-		SO3325	0.88	+1.2
3,476,342	-				+0.1
3,476,425	+				+0.4
3,476,425	+				+0.4
3,476,425	+				-0.2
3,476,425	+				+1.3
3,476,433	-				+0.2
3,476,433	-				-0.0
3,476,557	-		SO3326	0.40	+0.1
3,476,639	+		SO3326	0.79	+0.2
3,476,716	+				-0.6
3,476,761	+				-0.9
3,476,769	-				-0.5
3,476,769	-				+0.0
3,476,840	-				-0.2
3,476,850	-				-0.1
3,476,895	-				+0.1
3,476,895	-				+0.7
3,476,895	-				+0.8
3,476,920	+				+0.2
3,476,928	-				-1.7
3,476,928	-				+0.1
3,476,947	+				+0.4
3,476,955	-				-0.1
3,476,956	+				+0.6
3,476,957	+				+0.3
3,476,963	-				+0.2
3,476,982	+				-0.1
3,476,990	-				-0.7
3,477,006	+				-1.1
3,477,041	+		SO3328	0.12	-0.8
3,477,052	+		SO3328	0.15	-0.1
3,477,060	-		SO3328	0.16	+0.9
3,477,217	-		SO3328	0.51	+0.8
3,477,397	+		SO3328	0.90	+0.2
3,477,405	-				-1.3
3,477,405	-				+0.3
3,477,405	-				-1.6
3,477,496	-				+0.3
3,477,498	+				-0.3
3,477,506	-				-0.6
3,477,534	+				+0.4
3,477,542	-				+0.0
3,477,542	-				+1.2
3,477,546	+				-0.2
3,477,552	-				+0.2
3,477,558	-				+0.0
3,477,815	+				+0.7
3,477,907	-				+0.4
3,477,980	+				-0.4
3,477,980	+				-0.0
3,478,023	-				-0.5
3,478,050	-				-0.1
3,478,117	-		SO3331	0.18	+0.4