Strain Fitness in Shewanella oneidensis MR-1 around SO3168

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,302,971	+		SO3167	0.30	-0.4
3,303,033	+		SO3167	0.36	+0.8
3,303,420	+		SO3167	0.73	+0.7
3,303,433	+		SO3167	0.75	-0.7
3,303,503	-		SO3167	0.81	+0.8
3,303,503	-		SO3167	0.81	-0.6
3,303,592	-				+0.3
3,303,597	-				-0.4
3,303,643	+				+0.6
3,304,056	+				-0.2
3,304,148	-		SO3168	0.16	+0.5
3,304,154	-		SO3168	0.16	+0.7
3,304,171	-		SO3168	0.18	+0.3
3,304,252	+		SO3168	0.24	+0.9
3,304,270	+		SO3168	0.26	+0.8
3,304,292	-		SO3168	0.28	-0.2
3,304,306	+		SO3168	0.29	+0.0
3,304,306	+		SO3168	0.29	-0.6
3,304,308	-		SO3168	0.29	+0.2
3,304,496	+		SO3168	0.45	-1.7
3,304,509	+		SO3168	0.46	+0.3
3,304,511	-		SO3168	0.46	+1.2
3,304,565	-		SO3168	0.50	+0.2
3,304,575	-		SO3168	0.51	+0.1
3,304,615	+		SO3168	0.54	+1.0
3,304,620	-		SO3168	0.55	+1.4
3,304,630	+		SO3168	0.56	-0.3
3,304,638	-		SO3168	0.56	-0.2
3,304,679	+		SO3168	0.60	+1.1
3,304,679	+		SO3168	0.60	+1.3
3,304,747	+		SO3168	0.65	-0.0
3,304,753	+		SO3168	0.66	+0.6
3,304,755	-		SO3168	0.66	+0.0
3,304,798	+		SO3168	0.70	+0.1
3,304,803	+		SO3168	0.70	+0.1
3,304,806	-		SO3168	0.70	+0.7
3,304,816	-		SO3168	0.71	+1.0
3,304,820	-		SO3168	0.71	+0.8
3,304,994	-		SO3168	0.86	-0.4
3,305,135	-				+1.7
3,305,239	+				+0.3
3,305,261	+				-0.0
3,305,470	-		SO3169	0.29	+0.5
3,305,688	+		SO3169	0.86	+1.0
3,305,688	+		SO3169	0.86	+0.3
3,305,881	+		SO3170	0.11	+0.6
3,305,935	+		SO3170	0.14	-0.6
3,305,947	+		SO3170	0.15	+0.3
3,306,002	+		SO3170	0.19	-1.1
3,306,002	+		SO3170	0.19	+0.6
3,306,002	+		SO3170	0.19	-0.7
3,306,010	-		SO3170	0.20	+0.1
3,306,046	+		SO3170	0.23	-1.0