Strain Fitness in Shewanella oneidensis MR-1 around SO3109

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,237,026	+		SO3108	0.35	+0.1
3,237,253	-		SO3108	0.60	-0.4
3,237,465	-		SO3108	0.84	+0.3
3,237,478	-		SO3108	0.85	+0.0
3,237,616	+				+0.4
3,237,624	-				-0.6
3,237,676	-				+0.6
3,237,694	-				+0.6
3,237,798	+				+0.0
3,237,908	-				-0.4
3,238,002	-		SO3109	0.12	+0.5
3,238,062	-		SO3109	0.26	+0.6
3,238,111	+		SO3109	0.37	+0.2
3,238,121	+		SO3109	0.40	+1.0
3,238,129	-		SO3109	0.41	+0.2
3,238,129	-		SO3109	0.41	+1.6
3,238,137	+		SO3109	0.43	+0.3
3,238,207	-		SO3109	0.59	-0.8
3,238,215	+		SO3109	0.61	+0.3
3,238,403	+				+0.2
3,238,654	+	secF-2	SO3110	0.13	-1.5
3,239,045	+	secF-2	SO3110	0.54	-0.0
3,239,180	+	secF-2	SO3110	0.69	+1.4
3,239,275	-	secF-2	SO3110	0.79	+0.5
3,239,295	-	secF-2	SO3110	0.81	-0.1