Strain Fitness in Shewanella oneidensis MR-1 around SO3089

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,212,010	+		SO3088	0.62	-0.3
3,212,024	+		SO3088	0.63	+0.2
3,212,032	-		SO3088	0.63	-0.1
3,212,327	+		SO3088	0.77	-0.2
3,212,335	-		SO3088	0.77	+0.9
3,212,335	-		SO3088	0.77	+0.4
3,212,355	+		SO3088	0.78	-0.2
3,212,402	-		SO3088	0.81	+0.2
3,212,412	-		SO3088	0.81	-0.2
3,212,455	+		SO3088	0.83	-1.8
3,212,495	+		SO3088	0.85	+0.5
3,212,553	-		SO3088	0.88	+0.4
3,212,696	-				-0.6
3,212,811	+				-1.7
3,212,876	-				-0.1
3,212,913	-				-0.6
3,213,083	-		SO3089	0.21	+0.9
3,213,160	+		SO3089	0.26	+0.1
3,213,258	-		SO3089	0.34	+0.0
3,213,338	-		SO3089	0.40	-0.3
3,213,472	+		SO3089	0.50	+0.9
3,213,478	-		SO3089	0.51	+0.3
3,213,493	+		SO3089	0.52	+0.3
3,213,499	-		SO3089	0.52	-1.5
3,213,698	-		SO3089	0.67	+1.0
3,213,760	+		SO3089	0.72	+0.1
3,213,865	+		SO3089	0.80	-0.2
3,214,090	+				-0.1
3,214,092	-				-0.1
3,214,098	-				+0.4
3,214,135	+				+0.4
3,214,139	-				-0.3
3,214,141	-				-1.2
3,214,141	-				+0.7
3,214,194	+				+0.3
3,214,299	+				+0.1
3,214,396	+				+0.4
3,214,441	+				+0.1
3,214,543	+		SO3090	0.15	+0.9
3,214,543	+		SO3090	0.15	-0.2
3,214,551	-		SO3090	0.16	+1.7
3,214,899	-		SO3090	0.53	-0.4
3,214,901	-		SO3090	0.53	-0.2
3,214,979	+		SO3090	0.61	+0.3
3,214,987	-		SO3090	0.62	-1.1
3,215,115	-		SO3090	0.75	-0.1