Strain Fitness in Shewanella oneidensis MR-1 around SO2860

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,983,477	+		SO2858	0.75	+0.2
2,983,519	-				+0.2
2,983,550	+				+1.3
2,983,550	+				+1.0
2,983,550	+				+0.4
2,983,558	-				+0.1
2,983,558	-				-1.2
2,983,592	+				+0.2
2,983,599	+				+1.3
2,983,738	-				-0.4
2,983,986	-				-0.4
2,984,264	+				-0.2
2,984,349	-				+0.2
2,984,364	-				+0.4
2,984,523	-				+0.5
2,984,523	-				-0.1
2,984,562	+		SO2860	0.16	-0.0
2,984,679	+		SO2860	0.35	+0.7
2,984,692	-		SO2860	0.37	-0.0
2,984,968	+		SO2860	0.81	+1.5
2,984,968	+		SO2860	0.81	+0.3
2,984,968	+		SO2860	0.81	-0.5
2,984,976	-		SO2860	0.82	+1.5
2,984,976	-		SO2860	0.82	+1.4
2,984,978	+		SO2860	0.83	+0.4
2,984,978	+		SO2860	0.83	+1.5
2,984,986	-		SO2860	0.84	+0.2
2,984,986	-		SO2860	0.84	-0.4
2,985,041	+				+0.7
2,985,041	+				+0.5
2,985,041	+				-0.4
2,985,041	+				-0.6
2,985,049	-				+0.5
2,985,049	-				+0.2
2,985,059	-				+0.5
2,985,066	+				-1.1
2,985,151	+				+0.1
2,985,225	-				-0.3
2,985,242	-				-0.9
2,985,332	-		SO2861	0.15	-0.0
2,985,401	-		SO2861	0.23	+0.4
2,985,401	-		SO2861	0.23	-1.1
2,985,414	+		SO2861	0.25	-0.4
2,985,684	+		SO2861	0.56	+0.2
2,985,703	+		SO2861	0.58	+0.2
2,985,715	+		SO2861	0.60	-0.4
2,985,739	-		SO2861	0.63	+0.3
2,985,740	+		SO2861	0.63	-0.5
2,985,798	+		SO2861	0.70	+0.3
2,985,871	-		SO2861	0.78	-0.4
2,985,883	-		SO2861	0.80	-0.3
2,985,906	-		SO2861	0.82	+0.1
2,985,906	-		SO2861	0.82	+1.9
2,985,929	+		SO2861	0.85	+0.1
2,985,950	+		SO2861	0.87	-0.5
2,986,012	+				+0.6
2,986,012	+				-0.8
2,986,048	-				-0.2
2,986,058	-				-0.5