Strain Fitness in Shewanella oneidensis MR-1 around SO2769

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,892,173	-		SO2768	0.62	-0.9
2,892,213	-		SO2768	0.65	-0.9
2,892,417	+		SO2768	0.76	-0.2
2,892,462	+		SO2768	0.79	+0.4
2,892,462	+		SO2768	0.79	-0.4
2,892,470	-		SO2768	0.79	+0.7
2,892,489	-		SO2768	0.80	+0.9
2,892,538	+		SO2768	0.83	+0.6
2,892,632	+		SO2768	0.88	-0.3
2,892,655	+		SO2768	0.89	+0.1
2,892,663	-		SO2768	0.90	-0.0
2,892,675	+				-0.3
2,892,688	+				-0.5
2,892,688	+				+1.2
2,892,723	+				-0.3
2,892,731	-				-1.1
2,892,831	-				+0.2
2,892,864	+				+0.2
2,892,988	+				-0.7
2,893,142	-				+0.4
2,893,282	+		SO2769	0.24	+0.6
2,893,290	-		SO2769	0.25	+0.4
2,893,500	-		SO2769	0.50	+0.5
2,893,517	-		SO2769	0.52	-0.1
2,893,520	-		SO2769	0.53	-0.3
2,893,581	+		SO2769	0.60	+0.7
2,893,589	-		SO2769	0.61	+1.2
2,893,681	+		SO2769	0.71	-0.2
2,893,917	+				+0.8
2,894,021	+				+0.9
2,894,029	-				-0.1
2,894,029	-				+0.2
2,894,029	-				-0.3
2,894,061	+				+0.5
2,894,134	+	garR	SO2771	0.12	+0.0
2,894,142	-	garR	SO2771	0.13	+0.0
2,894,271	-	garR	SO2771	0.28	-1.0
2,894,574	-	garR	SO2771	0.62	-0.1
2,894,598	-	garR	SO2771	0.65	-1.1
2,894,721	-	garR	SO2771	0.79	+0.1
2,894,764	-	garR	SO2771	0.84	-0.7
2,894,789	+	garR	SO2771	0.87	+0.9
2,894,820	-				+0.4
2,894,848	+				-0.6
2,894,861	+				-0.4