Strain Fitness in Shewanella oneidensis MR-1 around SO2434

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,543,472	-				-1.5
2,543,480	-				+0.7
2,543,562	-				+0.3
2,543,672	-				-0.7
2,543,673	+				+0.5
2,543,694	+				-0.8
2,543,751	-				+0.4
2,543,864	-		SO2434	0.12	+0.3
2,543,973	+		SO2434	0.16	-0.6
2,543,991	+		SO2434	0.17	+0.5
2,544,178	-		SO2434	0.23	+0.3
2,544,188	-		SO2434	0.24	-1.1
2,544,363	+		SO2434	0.30	+0.0
2,544,392	-		SO2434	0.31	-0.0
2,544,397	+		SO2434	0.31	-0.1
2,544,435	-		SO2434	0.32	-0.2
2,544,711	-		SO2434	0.42	+0.3
2,544,812	+		SO2434	0.46	-0.1
2,544,825	-		SO2434	0.46	-0.6
2,544,827	+		SO2434	0.46	-0.3
2,544,835	-		SO2434	0.47	+0.1
2,544,846	+		SO2434	0.47	-0.2
2,544,970	-		SO2434	0.51	+0.7
2,544,996	+		SO2434	0.52	-0.2
2,545,004	-		SO2434	0.53	-0.2
2,545,035	-		SO2434	0.54	+0.4
2,545,081	+		SO2434	0.55	+0.2
2,545,108	+		SO2434	0.56	-0.2
2,545,108	+		SO2434	0.56	-0.9
2,545,108	+		SO2434	0.56	-0.6
2,545,116	-		SO2434	0.57	-0.2
2,545,210	+		SO2434	0.60	+0.4
2,545,211	-		SO2434	0.60	+0.4
2,545,211	-		SO2434	0.60	-0.1
2,545,218	-		SO2434	0.60	-1.0
2,545,218	-		SO2434	0.60	-0.1
2,545,250	+		SO2434	0.61	+1.1
2,545,258	+		SO2434	0.62	+0.2
2,545,337	-		SO2434	0.64	+0.1
2,545,396	+		SO2434	0.67	+0.3
2,545,403	-		SO2434	0.67	-0.3
2,545,409	-		SO2434	0.67	-0.1
2,545,595	-		SO2434	0.74	-1.4
2,545,597	+		SO2434	0.74	+0.5
2,545,871	+		SO2434	0.83	-0.1
2,545,890	-		SO2434	0.84	+1.4
2,545,938	+		SO2434	0.86	+0.2
2,545,982	+		SO2434	0.87	+0.2
2,545,982	+		SO2434	0.87	-0.0
2,546,107	+				-0.3
2,546,107	+				-0.8
2,546,125	-				-0.4
2,546,135	+				-0.5
2,546,135	+				-0.4
2,546,135	+				-0.3
2,546,143	-				-0.2
2,546,143	-				-0.2
2,546,230	+				+0.6
2,546,257	+				-0.2
2,546,266	+				+0.3
2,546,269	-				-0.9
2,546,294	-				+0.3
2,546,304	-				+0.4
2,546,352	-				+1.5
2,546,595	+		SO2435	0.15	-0.4
2,546,654	+		SO2435	0.23	+0.3
2,546,813	+		SO2435	0.45	-0.5
2,546,869	+		SO2435	0.52	+0.2
2,546,869	+		SO2435	0.52	+2.2
2,546,884	+		SO2435	0.54	-0.8
2,547,153	+				-0.3
2,547,155	-				+0.0
2,547,161	-				-0.7
2,547,164	+				+0.6