Strain Fitness in Shewanella oneidensis MR-1 around SO2180

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,291,081	+		SO2179	0.12	-0.4
2,291,129	+		SO2179	0.18	+0.9
2,291,437	-		SO2179	0.53	-1.0
2,291,437	-		SO2179	0.53	-0.1
2,291,494	-		SO2179	0.59	+0.9
2,291,535	+		SO2179	0.64	+0.8
2,291,543	-		SO2179	0.65	-0.1
2,291,543	-		SO2179	0.65	-0.4
2,291,608	-		SO2179	0.72	+0.9
2,291,608	-		SO2179	0.72	-0.1
2,291,825	+				+0.2
2,291,844	+				-0.0
2,291,844	+				-0.3
2,291,852	-				-0.3
2,291,928	-				+0.4
2,291,941	+				+0.4
2,292,041	+		SO2180	0.13	+0.4
2,292,043	+		SO2180	0.13	+0.1
2,292,043	-		SO2180	0.13	+1.8
2,292,098	+		SO2180	0.19	+0.2
2,292,106	-		SO2180	0.20	+0.1
2,292,252	+		SO2180	0.36	-0.1
2,292,260	+		SO2180	0.37	+0.7
2,292,373	+		SO2180	0.49	-0.3
2,292,466	-		SO2180	0.59	+0.1
2,292,466	-		SO2180	0.59	+0.3
2,292,466	-		SO2180	0.59	+1.0
2,292,468	-		SO2180	0.59	+0.6
2,292,743	+		SO2180	0.88	+0.4
2,292,743	+		SO2180	0.88	+0.9
2,292,782	+				+0.1
2,292,868	+				+0.4
2,293,089	-		SO2181	0.64	+0.8
2,293,708	+		SO2182	0.56	+0.2
2,293,708	+		SO2182	0.56	-0.7