Strain Fitness in Shewanella oneidensis MR-1 around SO1495

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,561,670	+	glgB	SO1494	0.62	-1.1
1,561,718	+	glgB	SO1494	0.65	-0.1
1,561,718	+	glgB	SO1494	0.65	-0.8
1,561,726	-	glgB	SO1494	0.65	-0.8
1,561,726	-	glgB	SO1494	0.65	+0.1
1,561,726	-	glgB	SO1494	0.65	+0.0
1,561,726	-	glgB	SO1494	0.65	+0.7
1,561,726	-	glgB	SO1494	0.65	-1.0
1,561,747	+	glgB	SO1494	0.66	-0.1
1,561,826	+	glgB	SO1494	0.69	+0.8
1,561,834	-	glgB	SO1494	0.70	-0.5
1,561,842	+	glgB	SO1494	0.70	-0.7
1,561,850	-	glgB	SO1494	0.70	-0.5
1,561,874	-	glgB	SO1494	0.72	-0.3
1,561,882	-	glgB	SO1494	0.72	+0.0
1,561,888	+	glgB	SO1494	0.72	+1.3
1,562,015	+	glgB	SO1494	0.78	+0.8
1,562,082	+	glgB	SO1494	0.81	-0.1
1,562,100	-	glgB	SO1494	0.82	+0.7
1,562,164	-	glgB	SO1494	0.84	-0.1
1,562,172	-	glgB	SO1494	0.85	+0.2
1,562,302	+				+0.8
1,562,354	-				-0.1
1,562,401	+				+0.6
1,562,409	-				+0.8
1,562,409	-				-0.2
1,562,433	+				-0.5
1,562,457	-				-0.6
1,562,459	+				+0.4
1,562,565	+				-0.7
1,562,742	-	glgX	SO1495	0.10	+0.5
1,562,746	+	glgX	SO1495	0.11	-0.0
1,562,746	+	glgX	SO1495	0.11	+0.8
1,562,746	+	glgX	SO1495	0.11	-0.2
1,562,746	+	glgX	SO1495	0.11	-0.2
1,562,754	-	glgX	SO1495	0.11	+0.3
1,562,764	-	glgX	SO1495	0.11	-0.5
1,562,781	+	glgX	SO1495	0.12	-0.4
1,562,936	-	glgX	SO1495	0.19	-0.4
1,563,074	+	glgX	SO1495	0.25	+2.0
1,563,089	-	glgX	SO1495	0.26	+0.2
1,563,326	+	glgX	SO1495	0.36	+0.9
1,563,326	+	glgX	SO1495	0.36	-0.0
1,563,552	+	glgX	SO1495	0.46	+0.2
1,563,552	+	glgX	SO1495	0.46	-0.3
1,563,560	-	glgX	SO1495	0.47	+0.1
1,563,560	-	glgX	SO1495	0.47	+0.0
1,563,589	-	glgX	SO1495	0.48	-0.2
1,563,589	-	glgX	SO1495	0.48	+0.5
1,563,693	-	glgX	SO1495	0.53	+0.1
1,563,991	-	glgX	SO1495	0.66	-0.6
1,564,031	+	glgX	SO1495	0.68	+0.3
1,564,031	+	glgX	SO1495	0.68	-0.5
1,564,084	-	glgX	SO1495	0.70	+0.5
1,564,132	+	glgX	SO1495	0.72	+0.6
1,564,258	+	glgX	SO1495	0.78	-0.6
1,564,331	+	glgX	SO1495	0.81	-0.4
1,564,368	+	glgX	SO1495	0.83	-0.3
1,564,375	-	glgX	SO1495	0.83	+0.4
1,564,376	-	glgX	SO1495	0.83	+0.4
1,564,376	-	glgX	SO1495	0.83	-0.3
1,564,385	+	glgX	SO1495	0.83	+0.3
1,564,430	+	glgX	SO1495	0.85	-0.1
1,564,483	+	glgX	SO1495	0.88	-0.0
1,564,496	-	glgX	SO1495	0.88	-0.6
1,564,585	+				+0.1
1,564,593	-				-0.1
1,564,657	+				+0.3
1,564,688	+				+0.5
1,564,688	+				+0.4
1,564,688	+				-0.9
1,564,696	-				-1.5
1,564,696	-				-1.0
1,564,979	-				-0.3
1,565,079	-		SO1496	0.13	+0.7
1,565,129	+		SO1496	0.15	-0.1
1,565,137	-		SO1496	0.15	-1.1
1,565,137	-		SO1496	0.15	-0.2
1,565,151	+		SO1496	0.15	+0.1
1,565,151	+		SO1496	0.15	-0.1
1,565,159	-		SO1496	0.16	-0.7
1,565,186	+		SO1496	0.17	-0.2
1,565,186	+		SO1496	0.17	-0.1
1,565,194	-		SO1496	0.17	-0.3
1,565,243	+		SO1496	0.19	-1.0
1,565,348	+		SO1496	0.23	+0.7
1,565,353	+		SO1496	0.23	-0.1
1,565,381	-		SO1496	0.25	-0.0
1,565,421	-		SO1496	0.26	-0.2
1,565,490	+		SO1496	0.29	-0.4
1,565,593	+		SO1496	0.33	+0.3
1,565,593	+		SO1496	0.33	+0.6
1,565,612	-		SO1496	0.34	+0.3
1,565,647	+		SO1496	0.35	+0.7
1,565,676	+		SO1496	0.36	-0.7