Strain Fitness in Shewanella oneidensis MR-1 around SO1389

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,445,955	-		SO1388	0.77	+0.0
1,445,963	+		SO1388	0.77	-0.5
1,446,075	-		SO1388	0.83	+0.1
1,446,085	-		SO1388	0.84	-0.0
1,446,087	+		SO1388	0.84	+0.3
1,446,095	-		SO1388	0.85	-0.5
1,446,220	+				+0.2
1,446,375	-				-0.4
1,446,389	+				-0.9
1,446,394	+				+1.2
1,446,402	+				+0.3
1,446,563	-				+0.2
1,446,580	-				-0.5
1,446,705	-				+0.2
1,446,823	+		SO1389	0.11	+0.7
1,446,831	-		SO1389	0.12	+0.5
1,446,876	+		SO1389	0.18	+0.5
1,446,920	+		SO1389	0.24	+0.2
1,447,047	-		SO1389	0.39	+0.1
1,447,190	+		SO1389	0.57	+0.7
1,447,200	+		SO1389	0.59	+0.2
1,447,200	+		SO1389	0.59	+0.7
1,447,213	-		SO1389	0.60	-0.8
1,447,297	+		SO1389	0.71	+0.3
1,447,343	-		SO1389	0.77	+0.2
1,447,373	+		SO1389	0.81	+0.4
1,447,445	-		SO1389	0.90	-1.1
1,447,605	+				-0.4
1,447,626	-				-2.2
1,447,744	-		SO1390	0.33	-0.7
1,447,763	+		SO1390	0.37	-0.3
1,447,825	-		SO1390	0.50	-0.6
1,447,841	-		SO1390	0.54	+0.3
1,447,918	-		SO1390	0.70	-0.1
1,448,186	+				-0.3
1,448,228	-				+0.4
1,448,275	+				+0.1
1,448,280	+				+0.8
1,448,283	-				-0.2
1,448,283	-				+0.3
1,448,283	-				+0.5
1,448,283	-				-0.1
1,448,283	-				-0.3
1,448,288	-				+0.4
1,448,406	+				+0.6
1,448,481	-		SO1391	0.15	+0.5