Strain Fitness in Shewanella oneidensis MR-1 around SO1139

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,179,186	+		SO1137	0.35	+0.8
1,179,202	-		SO1137	0.37	-0.1
1,179,290	-		SO1137	0.48	-0.9
1,179,474	-		SO1137	0.70	+0.2
1,179,493	+		SO1137	0.73	-0.5
1,179,536	+		SO1137	0.78	+0.2
1,179,536	+		SO1137	0.78	+0.5
1,179,536	+		SO1137	0.78	+0.0
1,179,544	-		SO1137	0.79	-0.1
1,179,544	-		SO1137	0.79	-0.1
1,179,546	-		SO1137	0.79	-0.2
1,179,581	+		SO1137	0.83	-0.4
1,179,651	+				+0.5
1,179,704	+				+0.0
1,180,029	+				+1.1
1,180,080	+				+0.2
1,180,205	+	fklB	SO1139	0.19	+0.2
1,180,288	+	fklB	SO1139	0.32	+0.5
1,180,296	-	fklB	SO1139	0.34	-1.3
1,180,298	+	fklB	SO1139	0.34	+0.5
1,180,371	+	fklB	SO1139	0.46	+0.3
1,180,391	+	fklB	SO1139	0.49	+0.5
1,180,406	+	fklB	SO1139	0.51	+0.7
1,180,406	+	fklB	SO1139	0.51	+0.1
1,180,425	+	fklB	SO1139	0.55	+0.6
1,180,425	+	fklB	SO1139	0.55	-0.7
1,180,647	+				-0.6
1,180,761	+				-0.1
1,180,761	+				-1.2
1,181,579	+				-0.1