Strain Fitness in Shewanella oneidensis MR-1 around SO4666

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,862,359	+				-0.1
4,862,366	+				-0.1
4,862,371	+				+0.3
4,862,411	+				-1.6
4,862,418	+				+0.6
4,862,426	-				-0.6
4,862,488	+				-0.2
4,862,488	+				+0.0
4,862,488	+				+0.1
4,862,488	+				-0.0
4,862,496	-				+1.0
4,862,506	+				-0.2
4,862,529	+				+0.5
4,862,537	-				+1.2
4,862,599	+				-0.0
4,862,607	+				+0.2
4,862,607	+				-0.5
4,862,642	-		SO4665	0.18	-1.7
4,862,688	+		SO4665	0.41	-0.2
4,862,688	+		SO4665	0.41	+0.3
4,862,694	-		SO4665	0.44	+0.2
4,862,843	+				+0.3
4,862,843	+				-0.2
4,862,879	+				-0.0
4,862,887	-				+0.2
4,862,914	-				+0.5
4,862,942	+				-0.2
4,862,942	-				-0.4
4,862,949	+				-1.1
4,862,956	-				+0.3
4,862,957	-				+0.2
4,862,957	-				-0.3
4,862,957	-				+0.5
4,863,034	+				+0.0
4,863,092	-				+0.0
4,863,122	+				+0.1
4,863,242	-				-2.1
4,863,246	+				-0.2
4,863,254	-				+0.4
4,863,254	-				+1.4
4,863,321	+				-0.2
4,863,338	-				+1.1
4,863,384	+	cytcB	SO4666	0.11	-1.4
4,863,470	-	cytcB	SO4666	0.24	-0.4
4,863,491	-	cytcB	SO4666	0.28	-1.8
4,863,503	-	cytcB	SO4666	0.30	-0.7
4,863,510	-	cytcB	SO4666	0.31	-0.8
4,863,544	-	cytcB	SO4666	0.36	-0.7
4,863,653	-	cytcB	SO4666	0.54	-0.5
4,863,664	+	cytcB	SO4666	0.55	-0.6
4,863,720	+	cytcB	SO4666	0.64	-0.1
4,863,778	+	cytcB	SO4666	0.74	+0.3
4,863,784	+	cytcB	SO4666	0.75	-0.5
4,863,784	+	cytcB	SO4666	0.75	-0.7
4,863,784	+	cytcB	SO4666	0.75	-1.0
4,863,816	-	cytcB	SO4666	0.80	-1.1
4,863,871	-	cytcB	SO4666	0.89	+0.1
4,863,889	+				-0.2
4,863,908	+				-0.5
4,863,916	-				+0.3
4,863,920	+				-1.6
4,863,920	+				-0.4
4,863,970	+				-0.5
4,863,992	+				-1.0
4,864,016	+				-1.3
4,864,026	+				-1.0
4,864,755	+				-0.2
4,864,773	-				-1.4
4,864,777	+				-0.1
4,864,850	-				-0.4
4,864,852	-				+0.5
4,864,852	-				-0.3
4,864,852	-				-0.4
4,864,928	-				+0.2
4,864,928	-				+0.6