Strain Fitness in Shewanella oneidensis MR-1 around SO4256

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,431,425	-				-0.8
4,431,430	-				-0.3
4,431,527	-				+0.1
4,431,684	+	pyrE	SO4255	0.26	+0.2
4,431,807	-	pyrE	SO4255	0.45	-0.6
4,431,818	-	pyrE	SO4255	0.47	+0.4
4,431,827	+	pyrE	SO4255	0.48	+0.7
4,431,827	+	pyrE	SO4255	0.48	-0.0
4,431,835	-	pyrE	SO4255	0.49	+0.4
4,431,835	-	pyrE	SO4255	0.49	+0.4
4,431,869	+	pyrE	SO4255	0.54	-0.3
4,431,911	+	pyrE	SO4255	0.61	-0.1
4,431,936	+	pyrE	SO4255	0.65	+0.6
4,431,951	-	pyrE	SO4255	0.67	-0.2
4,432,039	+	pyrE	SO4255	0.81	-0.1
4,432,039	+	pyrE	SO4255	0.81	-0.2
4,432,039	+	pyrE	SO4255	0.81	+0.3
4,432,039	+				+0.5
4,432,047	-	pyrE	SO4255	0.82	+0.2
4,432,069	+	pyrE	SO4255	0.85	-0.0
4,432,179	-				+0.2
4,432,250	+				+0.9
4,432,250	+				+0.2
4,432,258	-				-0.8
4,432,258	-				+0.2
4,432,330	+				-1.0
4,432,503	+	rph	SO4256	0.23	+0.3
4,432,519	-	rph	SO4256	0.25	-1.0
4,432,553	-	rph	SO4256	0.30	-0.2
4,432,645	-	rph	SO4256	0.43	-0.1
4,432,661	+	rph	SO4256	0.45	-0.9
4,432,835	+	rph	SO4256	0.70	-0.2
4,432,836	-	rph	SO4256	0.70	-0.7
4,432,843	-	rph	SO4256	0.71	-1.2
4,432,843	-	rph	SO4256	0.71	+0.0
4,432,843	-	rph	SO4256	0.71	-1.1
4,432,843	-	rph	SO4256	0.71	-0.3
4,432,843	-	rph	SO4256	0.71	-0.9
4,432,886	+	rph	SO4256	0.77	-0.5
4,432,939	+	rph	SO4256	0.84	+0.1
4,432,974	-	rph	SO4256	0.89	+0.2
4,432,974	-	rph	SO4256	0.89	-0.1
4,432,982	-				-1.4
4,433,031	+				+0.4
4,433,067	-				-0.1
4,433,133	-				-0.4
4,433,169	-				-0.2
4,433,192	+				+0.1
4,433,199	-				+0.0
4,433,215	+				-0.2
4,433,251	+				-0.4
4,433,278	+				+0.0
4,433,354	-		SO4257	0.11	-0.2
4,433,409	-		SO4257	0.17	-0.7
4,433,570	-		SO4257	0.36	+0.1
4,433,571	-		SO4257	0.36	-0.7
4,433,594	+		SO4257	0.39	+0.9
4,433,597	+		SO4257	0.39	-0.6
4,433,602	-		SO4257	0.40	-0.4
4,433,602	-		SO4257	0.40	-0.1
4,433,607	-		SO4257	0.40	+0.0
4,433,607	-		SO4257	0.40	-0.4
4,433,607	-		SO4257	0.40	+1.5
4,433,615	-		SO4257	0.41	+0.9
4,433,617	+		SO4257	0.41	+0.2
4,433,697	-		SO4257	0.51	-0.6
4,433,697	-		SO4257	0.51	-0.8
4,433,718	-		SO4257	0.53	-0.3
4,433,733	-		SO4257	0.55	-1.3
4,433,744	+		SO4257	0.56	+0.3
4,433,802	-		SO4257	0.63	-0.4
4,433,832	+		SO4257	0.66	-1.7
4,433,838	+		SO4257	0.67	+0.2
4,433,846	-		SO4257	0.68	-2.0
4,433,849	+		SO4257	0.68	-0.2
4,433,920	+		SO4257	0.76	-0.2
4,433,931	+		SO4257	0.78	+0.2
4,434,023	+		SO4257	0.88	-1.8
4,434,031	-		SO4257	0.89	-0.2