Strain Fitness in Shewanella oneidensis MR-1 around SO4204

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,369,832	+				+0.2
4,369,976	+	tatA	SO4202	0.39	+0.5
4,370,060	+	tatA	SO4202	0.71	-1.0
4,370,076	+	tatA	SO4202	0.77	+0.3
4,370,320	+	tatB	SO4203	0.39	-0.3
4,370,357	-	tatB	SO4203	0.47	-2.1
4,370,362	-	tatB	SO4203	0.48	-1.5
4,370,446	-	tatB	SO4203	0.67	-1.5
4,370,454	+	tatB	SO4203	0.69	-1.5
4,370,462	-	tatB	SO4203	0.71	-3.2
4,370,533	+	tatB	SO4203	0.86	-1.5
4,370,844	+	tatC	SO4204	0.33	-1.2
4,370,931	+	tatC	SO4204	0.45	-1.7
4,371,124	-	tatC	SO4204	0.70	-0.5
4,371,216	-	tatC	SO4204	0.83	-0.1
4,371,305	+				+0.0
4,371,429	+				-0.1
4,371,434	+				+0.9
4,371,434	+				-0.4
4,371,442	-		SO4205	0.11	+0.4
4,371,442	-		SO4205	0.11	-0.1
4,371,442	-		SO4205	0.11	+1.0
4,371,462	+		SO4205	0.14	+0.8
4,371,534	-		SO4205	0.28	+0.4
4,371,541	+		SO4205	0.30	-0.1
4,371,602	+		SO4205	0.41	+0.2
4,371,604	+		SO4205	0.42	-0.1
4,371,706	-		SO4205	0.61	+0.2
4,371,706	-		SO4205	0.61	-0.4
4,371,802	+		SO4205	0.80	+1.0
4,371,884	+				-0.2
4,371,889	+				+0.3
4,371,889	+				-0.2
4,372,197	+		SO4206	0.36	+0.1
4,372,232	+		SO4206	0.40	+0.3
4,372,232	+		SO4206	0.40	+0.6
4,372,240	-		SO4206	0.41	+0.0
4,372,257	+		SO4206	0.43	+0.3