Strain Fitness in Shewanella oneidensis MR-1 around SO3393

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,533,668	-		SO3392	0.20	-0.2
3,533,668	-		SO3392	0.20	-0.5
3,533,668	-		SO3392	0.20	+0.2
3,533,827	+		SO3392	0.35	+0.3
3,533,832	+		SO3392	0.35	+0.5
3,533,840	-		SO3392	0.36	-0.2
3,533,840	-		SO3392	0.36	-0.1
3,533,840	-		SO3392	0.36	-0.2
3,533,880	-		SO3392	0.40	-0.1
3,533,902	-		SO3392	0.42	+0.0
3,533,991	+		SO3392	0.50	+0.3
3,534,047	+		SO3392	0.55	-0.9
3,534,084	+		SO3392	0.59	-0.9
3,534,084	+		SO3392	0.59	-0.0
3,534,090	-		SO3392	0.59	-0.4
3,534,244	+		SO3392	0.74	-0.2
3,534,307	-		SO3392	0.80	-0.2
3,534,408	+		SO3392	0.89	+0.1
3,534,416	-		SO3392	0.90	-0.2
3,534,637	-				-1.6
3,534,683	-				-0.3
3,534,746	-		SO3393	0.16	+0.5
3,534,864	-		SO3393	0.36	-2.0
3,534,864	-		SO3393	0.36	-1.2
3,534,973	-		SO3393	0.55	-1.3
3,535,006	+		SO3393	0.61	+0.4
3,535,623	-				-0.5
3,535,745	+				-0.0
3,535,861	+				+0.0
3,536,003	-				-0.5
3,536,011	-				+0.5
3,536,063	+				-0.4
3,536,156	-		SO_3396	0.15	+0.1