Strain Fitness in Shewanella oneidensis MR-1 around SO3112

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,240,380	+	secD-2	SO3111	0.48	+0.2
3,240,542	+	secD-2	SO3111	0.57	+0.2
3,240,750	-	secD-2	SO3111	0.68	-0.0
3,240,751	-	secD-2	SO3111	0.68	-0.4
3,241,007	+	secD-2	SO3111	0.82	-0.2
3,241,153	+	secD-2	SO3111	0.90	-0.4
3,241,175	-				-0.7
3,241,196	-				+0.8
3,241,214	-				-0.0
3,241,342	+				+1.1
3,241,350	-				+0.0
3,241,350	-				-0.0
3,241,377	-				-1.9
3,241,651	-	yajC	SO3112	0.88	-1.9
3,241,651	-	yajC	SO3112	0.88	-0.1
3,241,913	-	tgt	SO3113	0.17	-0.8
3,242,050	+	tgt	SO3113	0.30	-1.3
3,242,071	+	tgt	SO3113	0.31	+0.4
3,242,236	-	tgt	SO3113	0.46	-0.4
3,242,286	-	tgt	SO3113	0.51	+1.0
3,242,320	+	tgt	SO3113	0.54	-0.4
3,242,345	+	tgt	SO3113	0.56	-0.4
3,242,364	+	tgt	SO3113	0.58	+0.2
3,242,427	+	tgt	SO3113	0.63	-0.2
3,242,663	-	tgt	SO3113	0.84	-0.1
3,242,669	+	tgt	SO3113	0.85	-0.1
3,242,669	+	tgt	SO3113	0.85	-1.3
3,242,677	-	tgt	SO3113	0.85	-0.1