Strain Fitness in Shewanella oneidensis MR-1 around SO2739
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
2,853,392 | - | -0.8 | |||
2,853,393 | - | -1.9 | |||
2,853,845 | - | bioC | SO2738 | 0.61 | -1.9 |
2,853,885 | - | bioC | SO2738 | 0.66 | -1.3 |
2,853,980 | - | bioC | SO2738 | 0.78 | -1.9 |
2,854,231 | - | +0.3 | |||
2,854,277 | - | -1.3 | |||
2,854,637 | - | bioF | SO2739 | 0.29 | -1.8 |
2,854,637 | - | bioF | SO2739 | 0.29 | -1.9 |
2,854,732 | - | bioF | SO2739 | 0.37 | -0.8 |
2,854,766 | - | bioF | SO2739 | 0.40 | -2.4 |
2,854,999 | - | bioF | SO2739 | 0.59 | -2.0 |
2,855,110 | - | bioF | SO2739 | 0.68 | -1.2 |
2,855,112 | - | bioF | SO2739 | 0.69 | -3.0 |
2,855,311 | - | bioF | SO2739 | 0.85 | -1.1 |
2,855,426 | - | -2.9 | |||
2,855,436 | - | -1.9 | |||
2,855,539 | - | SO2739.1 | 0.10 | +0.2 | |
2,855,580 | + | SO2739.1 | 0.31 | -1.2 | |
2,855,711 | + | -0.2 |
Or see this region's nucleotide sequence