Strain Fitness in Shewanella oneidensis MR-1 around SO2644

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,778,867	-		SO2643	0.70	-0.0
2,778,870	+		SO2643	0.71	-0.7
2,778,928	+		SO2643	0.72	-2.4
2,779,192	+		SO2643	0.81	+0.2
2,779,265	-		SO2643	0.84	-0.4
2,779,337	-		SO2643	0.86	-0.1
2,779,394	+		SO2643	0.88	-0.4
2,779,395	+		SO2643	0.88	+0.2
2,779,401	+		SO2643	0.88	-0.0
2,779,403	-		SO2643	0.88	-0.1
2,779,592	+				-0.1
2,779,636	-				-0.0
2,779,658	+				-0.1
2,779,658	+				+0.2
2,779,658	+				-0.3
2,779,658	+				+0.1
2,779,666	-				+0.8
2,779,728	+				-1.0
2,780,041	-				+0.1
2,780,255	+	ppsA	SO2644	0.16	+1.2
2,780,596	+	ppsA	SO2644	0.31	-1.1
2,780,604	-	ppsA	SO2644	0.31	-2.2
2,780,604	-	ppsA	SO2644	0.31	-0.7
2,780,674	-	ppsA	SO2644	0.34	-1.2
2,780,808	-	ppsA	SO2644	0.40	-0.1
2,781,066	+	ppsA	SO2644	0.51	-0.2
2,781,109	+	ppsA	SO2644	0.53	-0.7
2,781,110	+	ppsA	SO2644	0.53	+0.0
2,781,244	+	ppsA	SO2644	0.58	-0.2
2,781,244	+	ppsA	SO2644	0.58	-1.2
2,781,244	+	ppsA	SO2644	0.58	-1.3
2,781,252	-	ppsA	SO2644	0.59	+0.2
2,781,560	+	ppsA	SO2644	0.72	+0.9
2,781,709	+	ppsA	SO2644	0.78	-0.7
2,781,812	+	ppsA	SO2644	0.82	-1.4
2,781,863	+	ppsA	SO2644	0.84	-1.0
2,781,952	-	ppsA	SO2644	0.88	+0.1
2,781,952	-	ppsA	SO2644	0.88	-0.0
2,781,997	-				-1.8
2,782,225	+				+0.8
2,782,402	+				+1.1
2,782,418	-				-0.9
2,782,652	+		SO2645	0.36	-0.2
2,782,677	+		SO2645	0.39	-0.3
2,782,677	+		SO2645	0.39	+0.2
2,782,677	+		SO2645	0.39	-0.7
2,782,677	+		SO2645	0.39	+0.1
2,782,677	+		SO2645	0.39	-0.4
2,782,685	-		SO2645	0.40	+0.0
2,782,685	-		SO2645	0.40	-0.8
2,782,685	-		SO2645	0.40	-0.2
2,782,685	-		SO2645	0.40	-0.0
2,782,685	-		SO2645	0.40	+0.0
2,782,748	+		SO2645	0.48	+0.5
2,782,748	+		SO2645	0.48	+0.3
2,782,756	-		SO2645	0.49	+0.5
2,782,783	-		SO2645	0.52	-0.9
2,782,792	+		SO2645	0.53	+0.5
2,782,792	+		SO2645	0.53	+0.5
2,782,845	-		SO2645	0.60	-0.2
2,782,906	+		SO2645	0.67	-0.6
2,782,906	+		SO2645	0.67	-0.3
2,782,906	+		SO2645	0.67	-0.5
2,782,906	+		SO2645	0.67	+0.4
2,782,906	+		SO2645	0.67	+0.7
2,782,906	+		SO2645	0.67	-0.2
2,782,914	-		SO2645	0.68	-0.5
2,782,914	-		SO2645	0.68	+0.3
2,782,914	-		SO2645	0.68	+0.0
2,782,914	-		SO2645	0.68	+0.4
2,782,914	-		SO2645	0.68	-0.7
2,783,012	-		SO2645	0.80	+0.6
2,783,036	-		SO2645	0.83	-0.4
2,783,157	-				+1.2
2,783,181	+				+0.5
2,783,189	-				-0.1
2,783,189	-				+0.4
2,783,191	+				+0.2