Strain Fitness in Shewanella oneidensis MR-1 around SO2421

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,529,956	-	sppA	SO2420	0.55	+1.2
2,529,956	-	sppA	SO2420	0.55	+1.1
2,530,137	-	sppA	SO2420	0.64	+0.1
2,530,199	+	sppA	SO2420	0.68	-0.6
2,530,253	-	sppA	SO2420	0.71	+0.4
2,530,323	+	sppA	SO2420	0.75	-0.4
2,530,926	+				+0.2
2,531,018	-	ansA	SO2421	0.11	-2.2
2,531,079	-	ansA	SO2421	0.17	-0.0
2,531,215	-	ansA	SO2421	0.31	-1.3
2,531,298	+	ansA	SO2421	0.39	-0.5
2,531,298	+	ansA	SO2421	0.39	-0.7
2,531,540	-	ansA	SO2421	0.63	-0.7
2,531,632	-	ansA	SO2421	0.72	-0.3
2,531,969	+				-0.2
2,531,977	-				+0.1
2,531,977	-				+0.0
2,532,056	-		SO2422	0.24	-0.4
2,532,172	-		SO2422	0.66	+1.0
2,532,217	-		SO2422	0.82	+0.7
2,532,226	-		SO2422	0.85	+0.6
2,532,272	-				-0.0
2,532,272	-				+0.2
2,532,353	-		SO2423	0.28	-0.7
2,532,420	-		SO2423	0.49	-0.4
2,532,644	+				+0.8
2,532,759	-		SO2424	0.15	-0.2
2,532,837	+		SO2424	0.22	+0.3
2,532,845	-		SO2424	0.23	+0.3
2,532,845	-		SO2424	0.23	-1.0
2,532,869	+		SO2424	0.25	+1.0
2,532,896	+		SO2424	0.27	-0.4