Strain Fitness in Shewanella oneidensis MR-1 around SO2015

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,112,883	+				-0.6
2,112,903	+				-0.3
2,112,918	+				-0.4
2,112,972	-				-0.1
2,113,040	+				-0.0
2,113,040	+				-1.0
2,113,040	+				-0.2
2,113,040	+				-0.3
2,113,048	-				+0.0
2,113,048	-				-0.3
2,113,048	-				+0.3
2,113,048	-				+0.4
2,113,048	-				+0.2
2,113,175	-				-1.0
2,113,246	-		SO2014	0.11	-0.9
2,113,362	-		SO2014	0.46	+0.0
2,113,576	+				-1.0
2,113,691	+	recR	SO2015	0.23	-0.9
2,113,691	+	recR	SO2015	0.23	-0.5
2,113,864	+	recR	SO2015	0.52	-0.1
2,113,920	+	recR	SO2015	0.61	-1.1
2,113,922	-	recR	SO2015	0.62	-1.8
2,114,115	-				-0.8
2,114,237	-				+0.8
2,114,237	-				-0.3
2,114,237	-				+0.0
2,114,571	+				-0.0
2,114,730	+	htpG	SO2016	0.16	+1.0
2,114,768	-	htpG	SO2016	0.18	+0.5
2,115,081	+	htpG	SO2016	0.34	+0.6
2,115,126	+	htpG	SO2016	0.37	+0.2
2,115,126	+	htpG	SO2016	0.37	+0.5
2,115,134	-	htpG	SO2016	0.37	-0.5