Strain Fitness in Shewanella oneidensis MR-1 around SO2012

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,108,396	-				+0.6
2,108,398	+				+0.0
2,108,509	+		SO2011	0.13	-0.6
2,108,509	+		SO2011	0.13	+1.3
2,108,509	+		SO2011	0.13	+0.1
2,108,532	-		SO2011	0.20	-0.7
2,108,540	+		SO2011	0.22	+0.0
2,108,716	+		SO2011	0.69	+0.4
2,108,841	-				+0.6
2,108,982	-				-0.7
2,109,148	+				+0.0
2,109,160	+				-0.2
2,109,185	+				+0.8
2,109,205	+				+0.6
2,109,314	-				-0.3
2,109,529	+	apt	SO2012	0.43	-0.6
2,109,608	-	apt	SO2012	0.58	-0.6
2,109,857	+				+0.2