Strain Fitness in Shewanella oneidensis MR-1 around SO1979

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,082,600	-				-0.2
2,082,664	+		SO1978	0.16	-0.4
2,082,674	+		SO1978	0.17	-0.8
2,082,674	+		SO1978	0.17	+0.2
2,082,682	-		SO1978	0.18	+1.4
2,082,778	-		SO1978	0.28	+0.6
2,082,797	+		SO1978	0.30	+1.2
2,082,837	-		SO1978	0.34	+0.5
2,082,855	-		SO1978	0.36	+1.2
2,082,914	+		SO1978	0.42	-0.5
2,082,914	+		SO1978	0.42	-0.4
2,082,922	-		SO1978	0.42	-0.0
2,082,975	-		SO1978	0.48	+0.1
2,082,989	+		SO1978	0.49	-0.4
2,082,989	+		SO1978	0.49	-0.4
2,082,997	-		SO1978	0.50	+0.1
2,082,997	-		SO1978	0.50	-0.4
2,083,003	-		SO1978	0.51	+0.1
2,083,021	-		SO1978	0.52	+0.6
2,083,021	-		SO1978	0.52	-0.1
2,083,191	+		SO1978	0.69	-0.5
2,083,244	+		SO1978	0.75	+0.3
2,083,252	-		SO1978	0.76	+0.6
2,083,586	-				+0.4
2,083,652	-		SO1979	0.15	-1.6
2,083,736	+		SO1979	0.27	-1.3
2,083,793	+		SO1979	0.35	-1.4
2,083,793	+		SO1979	0.35	-0.8
2,083,796	-		SO1979	0.35	-0.2
2,083,803	+		SO1979	0.36	-2.3
2,083,811	-		SO1979	0.37	-0.4
2,083,811	-		SO1979	0.37	-1.6
2,083,811	-		SO1979	0.37	-0.1
2,083,857	+		SO1979	0.44	-0.0
2,083,865	-		SO1979	0.45	+0.5
2,083,865	-		SO1979	0.45	-1.8
2,084,054	-		SO1979	0.71	+0.2
2,084,061	-		SO1979	0.72	-0.3
2,084,097	+		SO1979	0.77	-0.8
2,084,285	+				-0.3
2,084,307	-				+0.4
2,084,319	-				-0.2
2,084,626	-				-0.7
2,084,859	+		SO1980	0.27	-0.4
2,084,883	-		SO1980	0.29	-0.1
2,084,908	-		SO1980	0.32	+0.1
2,084,919	+		SO1980	0.33	-0.1
2,084,943	+		SO1980	0.36	+0.0
2,085,165	+		SO1980	0.61	-0.2
2,085,173	-		SO1980	0.61	-0.1
2,085,191	+		SO1980	0.63	-0.3
2,085,199	-		SO1980	0.64	-0.1
2,085,248	+		SO1980	0.70	-0.6