Strain Fitness in Shewanella oneidensis MR-1 around SO1331

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,387,631	-	mutH	SO1330	0.63	-0.9
1,387,750	-	mutH	SO1330	0.80	-0.2
1,387,776	+	mutH	SO1330	0.84	+0.2
1,387,776	+	mutH	SO1330	0.84	+0.3
1,387,866	+				+0.1
1,388,047	-				+0.6
1,388,108	+				-0.5
1,388,108	+				-0.8
1,388,108	+				-1.0
1,388,434	+				-0.0
1,388,682	+		SO1331	0.21	-1.2
1,388,770	+		SO1331	0.38	-3.4
1,388,840	-		SO1331	0.51	-0.7
1,388,948	+		SO1331	0.72	-1.1
1,388,985	+		SO1331	0.79	-1.1
1,389,110	+				+0.2
1,389,170	-				+0.0
1,389,181	+				+0.4
1,389,189	-				+0.2
1,389,237	+				-0.2
1,389,252	-				-0.2
1,389,330	+				+0.3
1,389,607	-	ptsP	SO1332	0.22	-0.3
1,389,637	+	ptsP	SO1332	0.23	-0.2
1,389,637	+	ptsP	SO1332	0.23	+0.2
1,389,637	+	ptsP	SO1332	0.23	+0.3
1,389,645	-	ptsP	SO1332	0.23	-0.4
1,389,694	+	ptsP	SO1332	0.26	+0.3
1,389,784	-	ptsP	SO1332	0.30	-0.2
1,389,897	-	ptsP	SO1332	0.35	+0.6
1,390,026	+	ptsP	SO1332	0.41	+1.1