Strain Fitness in Shewanella oneidensis MR-1 around SO1104

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,146,706	+	nqrA-2	SO1103	0.35	-0.7
1,146,798	+	nqrA-2	SO1103	0.42	-0.5
1,147,050	-	nqrA-2	SO1103	0.61	-1.5
1,147,196	-	nqrA-2	SO1103	0.72	-0.6
1,147,366	+	nqrA-2	SO1103	0.85	-1.2
1,147,458	+				-0.8
1,147,497	-				-0.7
1,147,532	-				+0.2
1,147,766	-	nqrB-2	SO1104	0.16	-1.3
1,147,981	+	nqrB-2	SO1104	0.34	-1.0
1,148,277	-	nqrB-2	SO1104	0.59	-0.6
1,148,282	+	nqrB-2	SO1104	0.59	-1.8
1,148,429	+	nqrB-2	SO1104	0.72	-0.8
1,148,736	+				+3.4
1,149,336	-	nqrC-2	SO1105	0.73	-1.4
1,149,408	-	nqrC-2	SO1105	0.82	-1.1