Strain Fitness in Shewanella oneidensis MR-1 around SO1307

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,357,748	-		SO1305	0.33	-0.0
1,357,794	-		SO1305	0.43	+0.5
1,357,816	+		SO1305	0.48	+0.1
1,358,299	+		SO1306	0.67	+0.2
1,358,357	+		SO1306	0.84	-0.9
1,358,408	-				+0.1
1,358,431	+				-0.3
1,358,439	-				-0.3
1,358,580	-				-0.0
1,358,621	-				-0.5
1,358,723	+	aqpZ	SO1307	0.16	-0.0
1,358,755	-	aqpZ	SO1307	0.21	+0.8
1,358,765	-	aqpZ	SO1307	0.22	+0.3
1,358,792	+	aqpZ	SO1307	0.26	+1.1
1,358,800	-	aqpZ	SO1307	0.27	+0.7
1,358,826	+	aqpZ	SO1307	0.31	+0.4
1,358,834	-	aqpZ	SO1307	0.32	+1.8
1,358,861	-	aqpZ	SO1307	0.36	-1.4
1,358,995	-	aqpZ	SO1307	0.55	+0.1
1,359,095	+	aqpZ	SO1307	0.70	-0.1
1,359,127	+	aqpZ	SO1307	0.74	+0.3
1,359,135	-	aqpZ	SO1307	0.76	-0.2
1,359,230	+	aqpZ	SO1307	0.89	+0.7
1,359,259	+				+0.5
1,359,339	-				+0.2
1,359,361	+				-0.1
1,359,369	-				-0.5
1,359,460	-				-0.4
1,359,546	-				+0.3
1,359,582	-				+0.1
1,359,587	-				+0.1
1,359,671	-				+0.3
1,359,671	-				-0.5
1,359,671	-				-0.1
1,359,935	+				-0.0
1,360,035	+				+0.3
1,360,199	+				+0.2
1,360,205	-				-0.5
1,360,222	+				-0.0
1,360,222	+				+1.2