Experiment: 7H9 with 2,4-Dinitrophenol 0.1503 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv2483c and Rv2484c overlap by 4 nucleotides Rv2484c and Rv2485c are separated by 228 nucleotides
Rv2483c: Rv2483c - Possible transmembrane phospholipid biosynthesis bifunctional enzyme PlsC: putative L-3-phosphoserine phosphatase (O-phosphoserine phosphohydrolase) (PSP) (pspase) + 1-acyl-SN-glycerol-3-phosphate acyltransferase (1-AGP acyltransferase) (1-AGPAT) (lysophosphatidic acid acyltransferase) (LPAAT), at 2,789,280 to 2,791,022
Rv2483c
Rv2484c: Rv2484c - Possible triacylglycerol synthase (diacylglycerol acyltransferase), at 2,791,019 to 2,792,494
Rv2484c
Rv2485c: Rv2485c - Probable carboxylesterase LipQ, at 2,792,723 to 2,793,988
Rv2485c
Position (kb)
2791
2792
2793 Strain fitness (log2 ratio)
-1
0
1
2
3 at 2790.352 kb on + strand, within Rv2483c at 2790.388 kb on - strand, within Rv2483c at 2790.391 kb on + strand, within Rv2483c at 2790.392 kb on - strand, within Rv2483c at 2790.824 kb on + strand, within Rv2483c at 2791.182 kb on + strand, within Rv2484c at 2791.294 kb on - strand, within Rv2484c at 2791.298 kb on - strand, within Rv2484c at 2791.298 kb on - strand, within Rv2484c at 2791.726 kb on + strand, within Rv2484c at 2791.987 kb on + strand, within Rv2484c at 2791.988 kb on - strand, within Rv2484c at 2792.013 kb on + strand, within Rv2484c at 2792.013 kb on + strand, within Rv2484c at 2792.138 kb on + strand, within Rv2484c at 2792.138 kb on + strand, within Rv2484c at 2792.138 kb on + strand, within Rv2484c at 2792.138 kb on + strand, within Rv2484c at 2792.139 kb on - strand, within Rv2484c at 2792.439 kb on + strand at 2792.884 kb on - strand, within Rv2485c at 2792.884 kb on - strand, within Rv2485c at 2793.103 kb on + strand, within Rv2485c at 2793.103 kb on + strand, within Rv2485c at 2793.104 kb on - strand, within Rv2485c at 2793.104 kb on - strand, within Rv2485c at 2793.126 kb on + strand, within Rv2485c at 2793.126 kb on + strand, within Rv2485c at 2793.127 kb on - strand, within Rv2485c at 2793.135 kb on + strand, within Rv2485c at 2793.136 kb on - strand, within Rv2485c at 2793.369 kb on + strand, within Rv2485c at 2793.369 kb on + strand, within Rv2485c at 2793.369 kb on + strand, within Rv2485c at 2793.370 kb on - strand, within Rv2485c
Per-strain Table
Position Strand Gene LocusTag Fraction 7H9 with 2,4-Dinitrophenol 0.1503 mM remove 2,790,352 + Rv2483c 0.62 -0.9 2,790,388 - Rv2483c 0.64 +3.4 2,790,391 + Rv2483c 0.64 -0.7 2,790,392 - Rv2483c 0.64 +0.2 2,790,824 + Rv2483c 0.89 -0.5 2,791,182 + Rv2484c 0.11 -0.9 2,791,294 - Rv2484c 0.19 -0.5 2,791,298 - Rv2484c 0.19 -0.2 2,791,298 - Rv2484c 0.19 +0.1 2,791,726 + Rv2484c 0.48 -1.2 2,791,987 + Rv2484c 0.66 -0.0 2,791,988 - Rv2484c 0.66 -1.0 2,792,013 + Rv2484c 0.67 +0.6 2,792,013 + Rv2484c 0.67 +0.5 2,792,138 + Rv2484c 0.76 -0.7 2,792,138 + Rv2484c 0.76 -0.4 2,792,138 + Rv2484c 0.76 -1.1 2,792,138 + Rv2484c 0.76 -1.0 2,792,139 - Rv2484c 0.76 -0.5 2,792,439 + +0.1 2,792,884 - Rv2485c 0.13 -0.4 2,792,884 - Rv2485c 0.13 -0.3 2,793,103 + Rv2485c 0.30 +0.4 2,793,103 + Rv2485c 0.30 -0.4 2,793,104 - Rv2485c 0.30 +0.2 2,793,104 - Rv2485c 0.30 -0.2 2,793,126 + Rv2485c 0.32 +0.3 2,793,126 + Rv2485c 0.32 -0.6 2,793,127 - Rv2485c 0.32 -0.2 2,793,135 + Rv2485c 0.33 +0.4 2,793,136 - Rv2485c 0.33 -0.0 2,793,369 + Rv2485c 0.51 -0.0 2,793,369 + Rv2485c 0.51 -0.5 2,793,369 + Rv2485c 0.51 -0.3 2,793,370 - Rv2485c 0.51 -1.1
Or see this region's nucleotide sequence