Experiment: 7H9 with 2,4-Dinitrophenol 0.1503 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0505c and Rv0506 are separated by 173 nucleotides Rv0506 and Rv0507 overlap by 4 nucleotides
Rv0505c: Rv0505c - Possible phosphoserine phosphatase SerB1 (PSP) (O-phosphoserine phosphohydrolase) (pspase), at 595,464 to 596,585
Rv0505c
Rv0506: Rv0506 - Probable conserved membrane protein MmpS2, at 596,759 to 597,202
Rv0506
Rv0507: Rv0507 - Probable conserved transmembrane transport protein MmpL2, at 597,199 to 600,105
Rv0507
Position (kb) 596
597
598 Strain fitness (log2 ratio) -1
0
1 at 596.650 kb on - strand at 596.654 kb on + strand at 596.659 kb on - strand at 596.682 kb on + strand at 596.683 kb on - strand at 596.683 kb on - strand at 596.691 kb on + strand at 596.692 kb on - strand at 596.708 kb on + strand at 596.720 kb on + strand at 596.721 kb on - strand at 596.730 kb on + strand at 596.731 kb on - strand at 596.731 kb on - strand at 596.845 kb on + strand, within Rv0506 at 596.846 kb on - strand, within Rv0506 at 596.846 kb on - strand, within Rv0506 at 596.846 kb on - strand, within Rv0506 at 596.846 kb on - strand, within Rv0506 at 596.846 kb on - strand, within Rv0506 at 596.945 kb on + strand, within Rv0506 at 596.945 kb on + strand, within Rv0506 at 596.946 kb on - strand, within Rv0506 at 596.946 kb on - strand, within Rv0506 at 596.946 kb on - strand, within Rv0506 at 596.946 kb on - strand, within Rv0506 at 596.946 kb on - strand, within Rv0506 at 596.985 kb on - strand, within Rv0506 at 597.357 kb on - strand at 597.444 kb on - strand at 597.496 kb on + strand, within Rv0507 at 597.496 kb on + strand, within Rv0507 at 597.497 kb on - strand, within Rv0507 at 597.497 kb on - strand, within Rv0507 at 597.497 kb on - strand, within Rv0507 at 597.497 kb on - strand, within Rv0507 at 597.498 kb on + strand, within Rv0507 at 597.613 kb on + strand, within Rv0507 at 597.614 kb on - strand, within Rv0507 at 597.625 kb on + strand, within Rv0507 at 597.625 kb on + strand, within Rv0507 at 597.626 kb on - strand, within Rv0507 at 597.655 kb on + strand, within Rv0507 at 597.721 kb on + strand, within Rv0507 at 597.721 kb on + strand, within Rv0507 at 597.777 kb on + strand, within Rv0507 at 597.778 kb on - strand, within Rv0507 at 597.778 kb on - strand, within Rv0507 at 597.778 kb on - strand, within Rv0507 at 597.778 kb on - strand, within Rv0507 at 597.783 kb on + strand, within Rv0507 at 597.828 kb on - strand, within Rv0507 at 597.830 kb on - strand, within Rv0507 at 597.997 kb on + strand, within Rv0507 at 598.005 kb on - strand, within Rv0507 at 598.132 kb on + strand, within Rv0507 at 598.132 kb on + strand, within Rv0507 at 598.133 kb on - strand, within Rv0507
Per-strain Table
Position Strand Gene LocusTag Fraction 7H9 with 2,4-Dinitrophenol 0.1503 mM remove 596,650 - +0.5 596,654 + +0.4 596,659 - +0.8 596,682 + -0.2 596,683 - -0.3 596,683 - -0.2 596,691 + -0.6 596,692 - +0.2 596,708 + -0.9 596,720 + -0.5 596,721 - -0.1 596,730 + -1.1 596,731 - -0.5 596,731 - -0.6 596,845 + Rv0506 0.19 -0.6 596,846 - Rv0506 0.20 -0.7 596,846 - Rv0506 0.20 -0.5 596,846 - Rv0506 0.20 -0.6 596,846 - Rv0506 0.20 -1.0 596,846 - Rv0506 0.20 -0.8 596,945 + Rv0506 0.42 -1.2 596,945 + Rv0506 0.42 -0.6 596,946 - Rv0506 0.42 -0.4 596,946 - Rv0506 0.42 -0.6 596,946 - Rv0506 0.42 +0.5 596,946 - Rv0506 0.42 -0.9 596,946 - Rv0506 0.42 -0.5 596,985 - Rv0506 0.51 -0.6 597,357 - +1.0 597,444 - -0.8 597,496 + Rv0507 0.10 -1.0 597,496 + Rv0507 0.10 -0.5 597,497 - Rv0507 0.10 -0.4 597,497 - Rv0507 0.10 +0.4 597,497 - Rv0507 0.10 -0.0 597,497 - Rv0507 0.10 -0.5 597,498 + Rv0507 0.10 -0.2 597,613 + Rv0507 0.14 -0.4 597,614 - Rv0507 0.14 -0.2 597,625 + Rv0507 0.15 +0.8 597,625 + Rv0507 0.15 -0.5 597,626 - Rv0507 0.15 -1.3 597,655 + Rv0507 0.16 -0.4 597,721 + Rv0507 0.18 +0.5 597,721 + Rv0507 0.18 +0.2 597,777 + Rv0507 0.20 -0.5 597,778 - Rv0507 0.20 -0.5 597,778 - Rv0507 0.20 -0.5 597,778 - Rv0507 0.20 -1.7 597,778 - Rv0507 0.20 -0.5 597,783 + Rv0507 0.20 -0.5 597,828 - Rv0507 0.22 -0.9 597,830 - Rv0507 0.22 +0.8 597,997 + Rv0507 0.27 -0.6 598,005 - Rv0507 0.28 -1.0 598,132 + Rv0507 0.32 +0.2 598,132 + Rv0507 0.32 +0.5 598,133 - Rv0507 0.32 -0.2
Or see this region's nucleotide sequence