Experiment: 7H9 with Phenazine ethosulfate 0.0137 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv3605c and Rv3606c overlap by 1 nucleotides Rv3606c and Rv3607c overlap by 4 nucleotides Rv3607c and Rv3608c overlap by 8 nucleotides Rv3608c and Rv3609c overlap by 4 nucleotides Rv3609c and Rv3610c are separated by 15 nucleotides
Rv3605c: Rv3605c - Probable conserved secreted protein, at 4,047,705 to 4,048,181
Rv3605c
Rv3606c: Rv3606c - 2-amino-4-hydroxy-6- hydroxymethyldihydropteridinepyrophosphokinase FolK (7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase) (HPPK) (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase) (PPPK) (2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase) (7,8-dihydro-6-hydroxymethylpterin-diphosphokinase) (6-hydroxymethyl-7,8-dihydropterin diphosphokinase), at 4,048,181 to 4,048,747
Rv3606c
Rv3607c: Rv3607c - Probable dihydroneopterin aldolase FolB (DHNA), at 4,048,744 to 4,049,145
Rv3607c
Rv3608c: Rv3608c - Dihydropteroate synthase 1 FolP (DHPS 1) (dihydropteroate pyrophosphorylase 1) (dihydropteroate diphosphorylase 1), at 4,049,138 to 4,049,980
Rv3608c
Rv3609c: Rv3609c - GTP cyclohydrolase I FolE (GTP-ch-I), at 4,049,977 to 4,050,585
Rv3609c
Rv3610c: Rv3610c - Membrane-bound protease FtsH (cell division protein), at 4,050,601 to 4,052,883
Rv3610c
Position (kb) 4049
4050 Strain fitness (log2 ratio) -1
0
1 at 4048.237 kb on + strand at 4048.769 kb on - strand at 4050.729 kb on - strand at 4050.729 kb on - strand
Per-strain Table
Or see this region's nucleotide sequence