Experiment: 7H9 with Dicloxacillin 0.0069 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0789c and Rv0790c are separated by 21 nucleotides Rv0790c and Rv0791c overlap by 4 nucleotides Rv0791c and Rv0792c overlap by 4 nucleotides Rv0792c and Rv0793 are separated by 72 nucleotides
Rv0789c: Rv0789c - Hypothetical protein, at 883,451 to 884,050
Rv0789c
Rv0790c: Rv0790c - Hypothetical protein, at 884,072 to 884,800
Rv0790c
Rv0791c: Rv0791c - Conserved protein, at 884,797 to 885,840
Rv0791c
Rv0792c: Rv0792c - Probable transcriptional regulatory protein (probably GntR-family), at 885,837 to 886,646
Rv0792c
Rv0793: Rv0793 - Possible monooxygenase, at 886,719 to 887,024
Rv0793
Position (kb) 884
885
886 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 883.875 kb on + strand, within Rv0789c at 884.150 kb on + strand, within Rv0790c at 884.151 kb on - strand, within Rv0790c at 884.232 kb on + strand, within Rv0790c at 884.232 kb on + strand, within Rv0790c at 884.376 kb on + strand, within Rv0790c at 884.376 kb on + strand, within Rv0790c at 884.376 kb on + strand, within Rv0790c at 884.376 kb on + strand, within Rv0790c at 884.376 kb on + strand, within Rv0790c at 884.377 kb on - strand, within Rv0790c at 884.632 kb on - strand, within Rv0790c at 884.649 kb on + strand, within Rv0790c at 884.649 kb on + strand, within Rv0790c at 884.650 kb on - strand, within Rv0790c at 884.652 kb on + strand, within Rv0790c at 884.653 kb on - strand, within Rv0790c at 884.655 kb on + strand, within Rv0790c at 884.655 kb on + strand, within Rv0790c at 884.656 kb on - strand, within Rv0790c at 884.745 kb on + strand at 884.745 kb on + strand at 884.746 kb on - strand at 884.859 kb on - strand at 884.859 kb on - strand at 884.918 kb on + strand, within Rv0791c at 884.919 kb on - strand, within Rv0791c at 885.285 kb on - strand, within Rv0791c at 885.380 kb on + strand, within Rv0791c at 885.381 kb on - strand, within Rv0791c at 885.491 kb on + strand, within Rv0791c at 885.492 kb on - strand, within Rv0791c at 885.685 kb on + strand, within Rv0791c at 885.970 kb on + strand, within Rv0792c at 886.030 kb on - strand, within Rv0792c at 886.030 kb on - strand, within Rv0792c at 886.083 kb on + strand, within Rv0792c at 886.083 kb on + strand, within Rv0792c at 886.083 kb on + strand, within Rv0792c at 886.084 kb on - strand, within Rv0792c at 886.111 kb on + strand, within Rv0792c at 886.111 kb on + strand, within Rv0792c at 886.111 kb on + strand, within Rv0792c at 886.111 kb on + strand, within Rv0792c at 886.112 kb on - strand, within Rv0792c at 886.112 kb on - strand, within Rv0792c at 886.112 kb on - strand, within Rv0792c at 886.112 kb on - strand, within Rv0792c at 886.232 kb on + strand, within Rv0792c at 886.320 kb on - strand, within Rv0792c at 886.400 kb on + strand, within Rv0792c at 886.400 kb on + strand, within Rv0792c at 886.400 kb on + strand, within Rv0792c at 886.423 kb on - strand, within Rv0792c at 886.835 kb on + strand, within Rv0793 at 886.836 kb on - strand, within Rv0793 at 886.839 kb on + strand, within Rv0793 at 886.839 kb on + strand, within Rv0793 at 886.839 kb on + strand, within Rv0793 at 886.839 kb on + strand, within Rv0793 at 886.840 kb on - strand, within Rv0793
Per-strain Table
Position Strand Gene LocusTag Fraction 7H9 with Dicloxacillin 0.0069 mM remove 883,875 + Rv0789c 0.71 -0.1 884,150 + Rv0790c 0.11 -0.3 884,151 - Rv0790c 0.11 +1.5 884,232 + Rv0790c 0.22 +1.3 884,232 + Rv0790c 0.22 -0.0 884,376 + Rv0790c 0.42 -1.1 884,376 + Rv0790c 0.42 +1.9 884,376 + Rv0790c 0.42 -1.0 884,376 + Rv0790c 0.42 +1.9 884,376 + Rv0790c 0.42 +0.3 884,377 - Rv0790c 0.42 -2.5 884,632 - Rv0790c 0.77 +0.3 884,649 + Rv0790c 0.79 -1.8 884,649 + Rv0790c 0.79 -2.9 884,650 - Rv0790c 0.79 +0.4 884,652 + Rv0790c 0.80 +0.4 884,653 - Rv0790c 0.80 -0.5 884,655 + Rv0790c 0.80 -0.1 884,655 + Rv0790c 0.80 -0.4 884,656 - Rv0790c 0.80 -0.8 884,745 + +0.2 884,745 + -0.3 884,746 - -0.5 884,859 - -0.0 884,859 - -0.5 884,918 + Rv0791c 0.12 +0.6 884,919 - Rv0791c 0.12 +0.7 885,285 - Rv0791c 0.47 +0.4 885,380 + Rv0791c 0.56 +1.9 885,381 - Rv0791c 0.56 +0.3 885,491 + Rv0791c 0.66 -0.7 885,492 - Rv0791c 0.67 +0.3 885,685 + Rv0791c 0.85 -0.0 885,970 + Rv0792c 0.16 +1.1 886,030 - Rv0792c 0.24 -1.0 886,030 - Rv0792c 0.24 -0.5 886,083 + Rv0792c 0.30 -0.3 886,083 + Rv0792c 0.30 -1.4 886,083 + Rv0792c 0.30 -0.2 886,084 - Rv0792c 0.30 -0.1 886,111 + Rv0792c 0.34 -0.8 886,111 + Rv0792c 0.34 +0.2 886,111 + Rv0792c 0.34 -0.7 886,111 + Rv0792c 0.34 -0.7 886,112 - Rv0792c 0.34 +1.6 886,112 - Rv0792c 0.34 -0.5 886,112 - Rv0792c 0.34 -0.2 886,112 - Rv0792c 0.34 -0.0 886,232 + Rv0792c 0.49 -0.2 886,320 - Rv0792c 0.60 -0.6 886,400 + Rv0792c 0.70 -0.1 886,400 + Rv0792c 0.70 -1.6 886,400 + Rv0792c 0.70 +1.4 886,423 - Rv0792c 0.72 +0.0 886,835 + Rv0793 0.38 -0.9 886,836 - Rv0793 0.38 -0.2 886,839 + Rv0793 0.39 +2.8 886,839 + Rv0793 0.39 -0.9 886,839 + Rv0793 0.39 -1.1 886,839 + Rv0793 0.39 +0.1 886,840 - Rv0793 0.40 -0.2
Or see this region's nucleotide sequence