Experiment: 7H9 with Chloramphenicol 0.01 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0890c and Rv0891c are separated by 1 nucleotides Rv0891c and Rv0892 are separated by 397 nucleotides
Rv0890c: Rv0890c - Probable transcriptional regulatory protein (probably LuxR-family), at 989,948 to 992,596
Rv0890c
Rv0891c: Rv0891c - Possible transcriptional regulatory protein, at 992,598 to 993,455
Rv0891c
Rv0892: Rv0892 - Probable monooxygenase, at 993,853 to 995,340
Rv0892
Position (kb) 992
993
994 Strain fitness (log2 ratio) -2
-1
0
1
2 at 991.635 kb on + strand, within Rv0890c at 991.636 kb on - strand, within Rv0890c at 991.636 kb on - strand, within Rv0890c at 991.636 kb on - strand, within Rv0890c at 991.638 kb on + strand, within Rv0890c at 991.639 kb on - strand, within Rv0890c at 992.082 kb on - strand, within Rv0890c at 992.205 kb on - strand, within Rv0890c at 992.255 kb on + strand, within Rv0890c at 992.285 kb on + strand, within Rv0890c at 992.285 kb on + strand, within Rv0890c at 992.605 kb on - strand at 992.605 kb on - strand at 992.605 kb on - strand at 992.916 kb on + strand, within Rv0891c at 992.917 kb on - strand, within Rv0891c at 992.937 kb on + strand, within Rv0891c at 992.938 kb on - strand, within Rv0891c at 992.938 kb on - strand, within Rv0891c at 992.939 kb on + strand, within Rv0891c at 992.940 kb on - strand, within Rv0891c at 992.940 kb on - strand, within Rv0891c at 992.943 kb on + strand, within Rv0891c at 992.943 kb on + strand, within Rv0891c at 992.943 kb on + strand, within Rv0891c at 993.029 kb on + strand, within Rv0891c at 993.029 kb on + strand, within Rv0891c at 993.030 kb on - strand, within Rv0891c at 993.216 kb on + strand, within Rv0891c at 993.341 kb on + strand, within Rv0891c at 993.342 kb on - strand, within Rv0891c at 993.434 kb on + strand at 993.477 kb on - strand at 993.526 kb on + strand at 993.527 kb on - strand at 993.748 kb on + strand at 993.751 kb on - strand at 994.263 kb on - strand, within Rv0892
Per-strain Table
Position Strand Gene LocusTag Fraction 7H9 with Chloramphenicol 0.01 mM remove 991,635 + Rv0890c 0.64 -0.7 991,636 - Rv0890c 0.64 +0.2 991,636 - Rv0890c 0.64 +0.2 991,636 - Rv0890c 0.64 -0.9 991,638 + Rv0890c 0.64 -1.0 991,639 - Rv0890c 0.64 -2.2 992,082 - Rv0890c 0.81 -0.1 992,205 - Rv0890c 0.85 +0.2 992,255 + Rv0890c 0.87 +0.1 992,285 + Rv0890c 0.88 +1.7 992,285 + Rv0890c 0.88 -0.1 992,605 - -0.3 992,605 - -0.2 992,605 - +0.3 992,916 + Rv0891c 0.37 -0.1 992,917 - Rv0891c 0.37 -0.1 992,937 + Rv0891c 0.40 -0.7 992,938 - Rv0891c 0.40 -0.8 992,938 - Rv0891c 0.40 +0.4 992,939 + Rv0891c 0.40 -0.3 992,940 - Rv0891c 0.40 +0.2 992,940 - Rv0891c 0.40 -0.1 992,943 + Rv0891c 0.40 +1.6 992,943 + Rv0891c 0.40 -0.6 992,943 + Rv0891c 0.40 +0.0 993,029 + Rv0891c 0.50 +2.3 993,029 + Rv0891c 0.50 -0.9 993,030 - Rv0891c 0.50 -0.4 993,216 + Rv0891c 0.72 -0.4 993,341 + Rv0891c 0.87 +1.7 993,342 - Rv0891c 0.87 -0.8 993,434 + +1.3 993,477 - +0.2 993,526 + -0.5 993,527 - -0.7 993,748 + -0.4 993,751 - +1.0 994,263 - Rv0892 0.28 -0.5
Or see this region's nucleotide sequence