Experiment: 7H9 with Ceftriaxone hemi(heptahydrate) 0.12 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0861c and Rv0862c are separated by 190 nucleotides Rv0862c and Rv0863 overlap by 14 nucleotides Rv0863 and Rv0864 are separated by 9 nucleotides Rv0864 and Rv0865 overlap by 4 nucleotides
Rv0861c: Rv0861c - DNA helicase Ercc3, at 958,523 to 960,151
Rv0861c
Rv0862c: Rv0862c - Conserved protein, at 960,342 to 962,612
Rv0862c
Rv0863: Rv0863 - Conserved hypothetical protein, at 962,599 to 962,880
Rv0863
Rv0864: Rv0864 - Probable molybdenum cofactor biosynthesis protein C 2 MoaC2, at 962,890 to 963,393
Rv0864
Rv0865: Rv0865 - Probable molybdopterin biosynthesis Mog protein, at 963,390 to 963,872
Rv0865
Position (kb) 960
961
962
963 Strain fitness (log2 ratio) -2
-1
0
1 at 959.364 kb on + strand, within Rv0861c at 959.365 kb on - strand, within Rv0861c at 959.956 kb on - strand, within Rv0861c at 959.956 kb on - strand, within Rv0861c at 960.152 kb on + strand at 960.153 kb on - strand at 960.153 kb on - strand at 960.153 kb on - strand at 960.442 kb on - strand at 960.493 kb on + strand at 960.632 kb on + strand, within Rv0862c at 961.067 kb on - strand, within Rv0862c at 961.238 kb on + strand, within Rv0862c at 961.238 kb on + strand, within Rv0862c at 961.248 kb on + strand, within Rv0862c at 961.450 kb on - strand, within Rv0862c at 961.729 kb on - strand, within Rv0862c at 962.700 kb on + strand, within Rv0863 at 962.700 kb on + strand, within Rv0863 at 962.719 kb on + strand, within Rv0863 at 962.719 kb on + strand, within Rv0863 at 962.848 kb on + strand, within Rv0863 at 962.849 kb on - strand, within Rv0863 at 962.849 kb on - strand, within Rv0863 at 963.023 kb on + strand, within Rv0864 at 963.023 kb on + strand, within Rv0864 at 963.023 kb on + strand, within Rv0864 at 963.023 kb on + strand, within Rv0864 at 963.024 kb on - strand, within Rv0864 at 963.028 kb on - strand, within Rv0864 at 963.111 kb on + strand, within Rv0864 at 963.111 kb on + strand, within Rv0864 at 963.166 kb on - strand, within Rv0864 at 963.295 kb on + strand, within Rv0864 at 963.295 kb on + strand, within Rv0864 at 963.449 kb on + strand, within Rv0865 at 963.554 kb on - strand, within Rv0865
Per-strain Table
Position Strand Gene LocusTag Fraction 7H9 with Ceftriaxone hemi(heptahydrate) 0.12 mM remove 959,364 + Rv0861c 0.52 -0.1 959,365 - Rv0861c 0.52 -0.2 959,956 - Rv0861c 0.88 +1.7 959,956 - Rv0861c 0.88 -1.3 960,152 + +0.2 960,153 - +0.7 960,153 - -1.2 960,153 - -1.0 960,442 - -1.5 960,493 + +0.3 960,632 + Rv0862c 0.13 +1.1 961,067 - Rv0862c 0.32 -0.8 961,238 + Rv0862c 0.39 +0.2 961,238 + Rv0862c 0.39 +0.8 961,248 + Rv0862c 0.40 +1.6 961,450 - Rv0862c 0.49 +0.4 961,729 - Rv0862c 0.61 +0.7 962,700 + Rv0863 0.36 -0.0 962,700 + Rv0863 0.36 -0.3 962,719 + Rv0863 0.43 -0.7 962,719 + Rv0863 0.43 +0.9 962,848 + Rv0863 0.88 -0.6 962,849 - Rv0863 0.89 +0.1 962,849 - Rv0863 0.89 +0.1 963,023 + Rv0864 0.26 +0.3 963,023 + Rv0864 0.26 -0.2 963,023 + Rv0864 0.26 -0.5 963,023 + Rv0864 0.26 -0.3 963,024 - Rv0864 0.27 -0.3 963,028 - Rv0864 0.27 -0.4 963,111 + Rv0864 0.44 -1.1 963,111 + Rv0864 0.44 -1.4 963,166 - Rv0864 0.55 -1.3 963,295 + Rv0864 0.80 +0.1 963,295 + Rv0864 0.80 -0.5 963,449 + Rv0865 0.12 -2.0 963,554 - Rv0865 0.34 +0.9
Or see this region's nucleotide sequence