Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0021c and Rv0022c are separated by 141 nucleotides Rv0022c and Rv0023 are separated by 152 nucleotides Rv0023 and Rv0024 overlap by 4 nucleotides
Rv0021c: Rv0021c - Conserved hypothetical protein, at 25,913 to 26,881
Rv0021c
Rv0022c: Rv0022c - Probable transcriptional regulatory protein WhiB-like WhiB5, at 27,023 to 27,442
Rv0022c
Rv0023: Rv0023 - Possible transcriptional regulatory protein, at 27,595 to 28,365
Rv0023
Rv0024: Rv0024 - Putative secreted protein P60-related protein, at 28,362 to 29,207
Rv0024
Position (kb) 27
28 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 26.040 kb on + strand, within Rv0021c at 26.040 kb on + strand, within Rv0021c at 26.040 kb on + strand, within Rv0021c at 26.041 kb on - strand, within Rv0021c at 26.041 kb on - strand, within Rv0021c at 26.068 kb on - strand, within Rv0021c at 26.141 kb on + strand, within Rv0021c at 26.141 kb on + strand, within Rv0021c at 26.142 kb on - strand, within Rv0021c at 26.193 kb on + strand, within Rv0021c at 26.193 kb on + strand, within Rv0021c at 26.197 kb on + strand, within Rv0021c at 26.197 kb on + strand, within Rv0021c at 26.197 kb on + strand, within Rv0021c at 26.197 kb on + strand, within Rv0021c at 26.197 kb on + strand, within Rv0021c at 26.198 kb on - strand, within Rv0021c at 26.291 kb on - strand, within Rv0021c at 26.622 kb on + strand, within Rv0021c at 26.623 kb on - strand, within Rv0021c at 26.623 kb on - strand, within Rv0021c at 26.623 kb on - strand, within Rv0021c at 26.780 kb on + strand, within Rv0021c at 26.861 kb on - strand at 26.933 kb on - strand at 26.933 kb on - strand at 26.933 kb on - strand at 27.214 kb on - strand, within Rv0022c at 27.245 kb on + strand, within Rv0022c at 27.253 kb on - strand, within Rv0022c at 27.253 kb on - strand, within Rv0022c at 27.299 kb on + strand, within Rv0022c at 27.300 kb on - strand, within Rv0022c at 27.410 kb on + strand at 27.410 kb on + strand at 27.410 kb on + strand at 27.411 kb on - strand at 27.411 kb on - strand at 27.411 kb on - strand at 27.411 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 26,040 + Rv0021c 0.13 -0.5 26,040 + Rv0021c 0.13 -0.3 26,040 + Rv0021c 0.13 -0.6 26,041 - Rv0021c 0.13 -0.3 26,041 - Rv0021c 0.13 -0.2 26,068 - Rv0021c 0.16 -2.2 26,141 + Rv0021c 0.24 -0.1 26,141 + Rv0021c 0.24 +0.3 26,142 - Rv0021c 0.24 +1.2 26,193 + Rv0021c 0.29 -0.4 26,193 + Rv0021c 0.29 +0.9 26,197 + Rv0021c 0.29 +2.0 26,197 + Rv0021c 0.29 -0.2 26,197 + Rv0021c 0.29 -0.1 26,197 + Rv0021c 0.29 +0.3 26,197 + Rv0021c 0.29 -1.6 26,198 - Rv0021c 0.29 -0.4 26,291 - Rv0021c 0.39 -0.6 26,622 + Rv0021c 0.73 +0.3 26,623 - Rv0021c 0.73 -0.6 26,623 - Rv0021c 0.73 -0.6 26,623 - Rv0021c 0.73 -1.5 26,780 + Rv0021c 0.89 -0.4 26,861 - +0.0 26,933 - -0.2 26,933 - -0.3 26,933 - +1.9 27,214 - Rv0022c 0.45 -3.1 27,245 + Rv0022c 0.53 -0.4 27,253 - Rv0022c 0.55 -0.4 27,253 - Rv0022c 0.55 -1.6 27,299 + Rv0022c 0.66 -0.2 27,300 - Rv0022c 0.66 -0.5 27,410 + -0.8 27,410 + -1.2 27,410 + -0.5 27,411 - -0.5 27,411 - -0.4 27,411 - +1.7 27,411 - -1.2
Or see this region's nucleotide sequence