Experiment: 7H9 with Spectinomycin 0.029 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0373c and Rv0374c overlap by 4 nucleotides Rv0374c and Rv0375c are separated by 14 nucleotides Rv0375c and Rv0376c are separated by 75 nucleotides
Rv0373c: Rv0373c - Probable carbon monoxyde dehydrogenase (large chain), at 449,404 to 451,803
Rv0373c
Rv0374c: Rv0374c - Probable carbon monoxyde dehydrogenase (small chain), at 451,800 to 452,279
Rv0374c
Rv0375c: Rv0375c - Probable carbon monoxyde dehydrogenase (medium chain), at 452,294 to 453,154
Rv0375c
Rv0376c: Rv0376c - Conserved hypothetical protein, at 453,230 to 454,372
Rv0376c
Position (kb) 451
452
453 Strain fitness (log2 ratio) -2
-1
0
1 at 450.884 kb on + strand, within Rv0373c at 450.983 kb on + strand, within Rv0373c at 451.199 kb on + strand, within Rv0373c at 451.492 kb on + strand, within Rv0373c at 451.492 kb on + strand, within Rv0373c at 451.864 kb on + strand, within Rv0374c at 451.955 kb on + strand, within Rv0374c at 452.386 kb on - strand, within Rv0375c at 452.386 kb on - strand, within Rv0375c at 453.007 kb on - strand, within Rv0375c at 453.189 kb on - strand at 453.189 kb on - strand at 453.242 kb on + strand at 453.243 kb on - strand at 453.243 kb on - strand at 453.243 kb on - strand at 453.243 kb on - strand at 453.243 kb on - strand at 453.246 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 7H9 with Spectinomycin 0.029 mM remove 450,884 + Rv0373c 0.62 +0.7 450,983 + Rv0373c 0.66 -1.0 451,199 + Rv0373c 0.75 -0.0 451,492 + Rv0373c 0.87 +0.1 451,492 + Rv0373c 0.87 +0.0 451,864 + Rv0374c 0.13 -0.4 451,955 + Rv0374c 0.32 -0.9 452,386 - Rv0375c 0.11 +0.6 452,386 - Rv0375c 0.11 +0.1 453,007 - Rv0375c 0.83 -2.5 453,189 - -2.4 453,189 - -0.1 453,242 + -1.2 453,243 - +0.4 453,243 - +0.9 453,243 - +0.2 453,243 - -0.4 453,243 - -0.3 453,246 + +0.1
Or see this region's nucleotide sequence