Experiment: 7H9 with Erythromycin 0.016 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0456c and Rv0456A are separated by 272 nucleotides Rv0456A and Rv0456B overlap by 14 nucleotides Rv0456B and Rv0457c are separated by 68 nucleotides
Rv0456c: Rv0456c - enoyl-CoA hydratase EchA2 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase), at 545,889 to 546,803
Rv0456c
Rv0456A: Rv0456A - Possible toxin MazF1, at 547,076 to 547,357
Rv0456A
Rv0456B: Rv0456B - Possible antitoxin MazE1, at 547,344 to 547,517
Rv0456B
Rv0457c: Rv0457c - Probable peptidase, at 547,586 to 549,607
Rv0457c
Position (kb) 547
548 Strain fitness (log2 ratio) -1
0
1
2 at 546.352 kb on + strand, within Rv0456c at 546.352 kb on + strand, within Rv0456c at 546.601 kb on + strand, within Rv0456c at 546.772 kb on + strand at 546.772 kb on + strand at 546.772 kb on + strand at 546.773 kb on - strand at 546.803 kb on + strand at 546.804 kb on - strand at 547.036 kb on + strand at 547.036 kb on + strand at 547.036 kb on + strand at 547.037 kb on - strand at 547.245 kb on - strand, within Rv0456A at 547.360 kb on - strand at 547.474 kb on - strand, within Rv0456B at 547.481 kb on + strand, within Rv0456B at 547.481 kb on + strand, within Rv0456B at 547.482 kb on - strand, within Rv0456B at 547.482 kb on - strand, within Rv0456B at 547.482 kb on - strand, within Rv0456B at 547.482 kb on - strand, within Rv0456B at 547.484 kb on + strand, within Rv0456B at 547.491 kb on + strand, within Rv0456B at 547.492 kb on - strand, within Rv0456B at 547.494 kb on + strand, within Rv0456B at 547.497 kb on + strand, within Rv0456B at 547.497 kb on + strand, within Rv0456B at 547.505 kb on - strand at 547.507 kb on + strand at 547.515 kb on - strand at 547.690 kb on - strand at 547.787 kb on + strand at 547.787 kb on + strand at 547.879 kb on - strand, within Rv0457c at 548.178 kb on + strand, within Rv0457c at 548.179 kb on - strand, within Rv0457c at 548.179 kb on - strand, within Rv0457c at 548.224 kb on - strand, within Rv0457c at 548.313 kb on + strand, within Rv0457c at 548.357 kb on + strand, within Rv0457c
Per-strain Table
Position Strand Gene LocusTag Fraction 7H9 with Erythromycin 0.016 mM remove 546,352 + Rv0456c 0.51 -0.2 546,352 + Rv0456c 0.51 +2.1 546,601 + Rv0456c 0.78 -1.0 546,772 + +0.6 546,772 + +1.3 546,772 + -1.5 546,773 - -0.6 546,803 + +1.6 546,804 - -0.6 547,036 + -0.1 547,036 + -0.7 547,036 + -0.4 547,037 - +0.7 547,245 - Rv0456A 0.60 -1.7 547,360 - +0.4 547,474 - Rv0456B 0.75 +2.4 547,481 + Rv0456B 0.79 -0.1 547,481 + Rv0456B 0.79 +0.2 547,482 - Rv0456B 0.79 +0.5 547,482 - Rv0456B 0.79 +0.1 547,482 - Rv0456B 0.79 -0.9 547,482 - Rv0456B 0.79 +0.2 547,484 + Rv0456B 0.80 -0.5 547,491 + Rv0456B 0.84 -0.8 547,492 - Rv0456B 0.85 +0.1 547,494 + Rv0456B 0.86 -0.0 547,497 + Rv0456B 0.88 +1.4 547,497 + Rv0456B 0.88 -0.0 547,505 - -0.1 547,507 + +1.4 547,515 - +0.3 547,690 - -0.5 547,787 + -0.3 547,787 + +0.4 547,879 - Rv0457c 0.14 +0.0 548,178 + Rv0457c 0.29 -0.3 548,179 - Rv0457c 0.29 +0.1 548,179 - Rv0457c 0.29 -1.0 548,224 - Rv0457c 0.32 +0.4 548,313 + Rv0457c 0.36 -0.6 548,357 + Rv0457c 0.38 -0.5
Or see this region's nucleotide sequence