Experiment: 7H9 with Ciprofloxacin Hydrochloride 0.0012 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0764c and Rv0765c overlap by 1 nucleotides Rv0765c and Rv0766c overlap by 1 nucleotides Rv0766c and Rv0767c overlap by 4 nucleotides Rv0767c and Rv0768 are separated by 201 nucleotides
Rv0764c: Rv0764c - Cytochrome P450 51 Cyp51 (CYPL1) (P450-L1A1) (sterol 14-alpha demethylase) (lanosterol 14-alpha demethylase) (P450-14DM), at 856,682 to 858,037
Rv0764c
Rv0765c: Rv0765c - Probable oxidoreductase, at 858,037 to 858,864
Rv0765c
Rv0766c: Rv0766c - Probable cytochrome P450 123 Cyp123, at 858,864 to 860,072
Rv0766c
Rv0767c: Rv0767c - Conserved hypothetical protein, at 860,069 to 860,710
Rv0767c
Rv0768: Rv0768 - Probable aldehyde dehydrogenase NAD dependent AldA (aldehyde dehydrogenase [NAD+]), at 860,912 to 862,381
Rv0768
Position (kb) 858
859
860
861 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 858.390 kb on - strand, within Rv0765c at 858.514 kb on + strand, within Rv0765c at 858.865 kb on + strand at 859.229 kb on - strand, within Rv0766c at 859.492 kb on + strand, within Rv0766c at 859.867 kb on - strand, within Rv0766c at 860.030 kb on - strand at 860.099 kb on - strand at 860.127 kb on + strand at 860.154 kb on + strand, within Rv0767c at 860.180 kb on + strand, within Rv0767c at 860.466 kb on + strand, within Rv0767c at 860.502 kb on + strand, within Rv0767c at 860.502 kb on + strand, within Rv0767c at 860.502 kb on + strand, within Rv0767c at 860.503 kb on - strand, within Rv0767c at 860.508 kb on + strand, within Rv0767c at 860.508 kb on + strand, within Rv0767c at 860.508 kb on + strand, within Rv0767c at 860.603 kb on + strand, within Rv0767c at 860.604 kb on - strand, within Rv0767c at 860.909 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 7H9 with Ciprofloxacin Hydrochloride 0.0012 mM remove 858,390 - Rv0765c 0.43 -2.8 858,514 + Rv0765c 0.58 -0.3 858,865 + +0.4 859,229 - Rv0766c 0.30 -1.4 859,492 + Rv0766c 0.52 -1.0 859,867 - Rv0766c 0.83 +1.6 860,030 - +0.2 860,099 - -0.1 860,127 + +0.6 860,154 + Rv0767c 0.13 -0.3 860,180 + Rv0767c 0.17 +0.3 860,466 + Rv0767c 0.62 +0.6 860,502 + Rv0767c 0.67 -0.1 860,502 + Rv0767c 0.67 +0.8 860,502 + Rv0767c 0.67 -0.9 860,503 - Rv0767c 0.68 +0.5 860,508 + Rv0767c 0.68 -0.6 860,508 + Rv0767c 0.68 -0.6 860,508 + Rv0767c 0.68 -1.1 860,603 + Rv0767c 0.83 -0.6 860,604 - Rv0767c 0.83 -0.7 860,909 + +0.6
Or see this region's nucleotide sequence