Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0436c and Rv0437c overlap by 4 nucleotides Rv0437c and Rv0438c are separated by 60 nucleotides Rv0438c and Rv0439c are separated by 18 nucleotides
Rv0436c: Rv0436c - Probable CDP-diacylglycerol--serine O-phosphatidyltransferase PssA (PS synthase) (phosphatidylserine synthase), at 524,530 to 525,390
Rv0436c
Rv0437c: Rv0437c - Possible phosphatidylserine decarboxylase Psd (PS decarboxylase), at 525,387 to 526,082
Rv0437c
Rv0438c: Rv0438c - Probable molybdopterin biosynthesis protein MoeA2, at 526,143 to 527,360
Rv0438c
Rv0439c: Rv0439c - Probable dehydrogenase/reductase, at 527,379 to 528,314
Rv0439c
Position (kb) 526
527
528 Strain fitness (log2 ratio) -1
0
1
2 at 525.347 kb on - strand at 525.359 kb on - strand at 525.359 kb on - strand at 525.470 kb on - strand, within Rv0437c at 525.506 kb on - strand, within Rv0437c at 526.093 kb on + strand at 526.093 kb on + strand at 526.093 kb on + strand at 526.094 kb on - strand at 526.145 kb on - strand at 526.297 kb on - strand, within Rv0438c at 526.558 kb on + strand, within Rv0438c at 526.559 kb on - strand, within Rv0438c at 526.594 kb on + strand, within Rv0438c at 526.595 kb on - strand, within Rv0438c at 526.763 kb on - strand, within Rv0438c at 526.779 kb on + strand, within Rv0438c at 526.780 kb on - strand, within Rv0438c at 527.201 kb on - strand, within Rv0438c at 527.201 kb on - strand, within Rv0438c at 527.201 kb on - strand, within Rv0438c at 527.297 kb on + strand at 527.388 kb on + strand at 527.515 kb on + strand, within Rv0439c at 527.515 kb on + strand, within Rv0439c at 527.518 kb on + strand, within Rv0439c at 527.518 kb on + strand, within Rv0439c at 527.518 kb on + strand, within Rv0439c at 527.519 kb on - strand, within Rv0439c at 527.627 kb on + strand, within Rv0439c at 527.731 kb on + strand, within Rv0439c at 527.731 kb on + strand, within Rv0439c at 527.785 kb on + strand, within Rv0439c at 528.171 kb on + strand, within Rv0439c at 528.171 kb on + strand, within Rv0439c at 528.172 kb on - strand, within Rv0439c at 528.172 kb on - strand, within Rv0439c at 528.172 kb on - strand, within Rv0439c at 528.288 kb on - strand at 528.288 kb on - strand at 528.288 kb on - strand at 528.288 kb on - strand at 528.325 kb on + strand at 528.325 kb on + strand at 528.326 kb on - strand at 528.326 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 525,347 - +0.9 525,359 - -0.9 525,359 - +1.1 525,470 - Rv0437c 0.12 -0.1 525,506 - Rv0437c 0.17 -0.3 526,093 + +2.4 526,093 + -0.4 526,093 + -0.0 526,094 - -1.5 526,145 - -0.3 526,297 - Rv0438c 0.13 +0.8 526,558 + Rv0438c 0.34 -0.1 526,559 - Rv0438c 0.34 +1.0 526,594 + Rv0438c 0.37 -0.1 526,595 - Rv0438c 0.37 +0.6 526,763 - Rv0438c 0.51 +0.6 526,779 + Rv0438c 0.52 -0.6 526,780 - Rv0438c 0.52 +0.7 527,201 - Rv0438c 0.87 +0.2 527,201 - Rv0438c 0.87 -1.7 527,201 - Rv0438c 0.87 +1.0 527,297 + -0.5 527,388 + +0.1 527,515 + Rv0439c 0.15 -0.4 527,515 + Rv0439c 0.15 +0.2 527,518 + Rv0439c 0.15 -0.0 527,518 + Rv0439c 0.15 -1.1 527,518 + Rv0439c 0.15 -0.1 527,519 - Rv0439c 0.15 -0.5 527,627 + Rv0439c 0.26 +0.8 527,731 + Rv0439c 0.38 -1.2 527,731 + Rv0439c 0.38 -1.4 527,785 + Rv0439c 0.43 -0.7 528,171 + Rv0439c 0.85 +0.4 528,171 + Rv0439c 0.85 -0.7 528,172 - Rv0439c 0.85 +0.1 528,172 - Rv0439c 0.85 -0.3 528,172 - Rv0439c 0.85 -0.7 528,288 - +1.0 528,288 - -0.8 528,288 - -0.2 528,288 - -0.6 528,325 + -1.3 528,325 + -0.5 528,326 - -0.2 528,326 - -0.1
Or see this region's nucleotide sequence