Experiment: 7H9 with Chlorhexidine diacetate salt 0.0021 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv3131 and Rv3132c overlap by 21 nucleotides Rv3132c and Rv3133c overlap by 4 nucleotides Rv3133c and Rv3134c are separated by 27 nucleotides
Rv3131: Rv3131 - Conserved protein, at 3,496,551 to 3,497,549
Rv3131
Rv3132c: Rv3132c - Two component sensor histidine kinase DevS, at 3,497,529 to 3,499,265
Rv3132c
Rv3133c: Rv3133c - Two component transcriptional regulatory protein DevR (probably LuxR/UhpA-family), at 3,499,262 to 3,499,915
Rv3133c
Rv3134c: Rv3134c - Universal stress protein family protein, at 3,499,943 to 3,500,749
Rv3134c
Position (kb)
3497
3498
3499
3500 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3496.679 kb on + strand, within Rv3131 at 3497.959 kb on - strand, within Rv3132c at 3498.755 kb on - strand, within Rv3132c at 3498.924 kb on + strand, within Rv3132c at 3499.011 kb on - strand, within Rv3132c at 3499.063 kb on - strand, within Rv3132c at 3499.365 kb on + strand, within Rv3133c at 3499.366 kb on - strand, within Rv3133c at 3499.366 kb on - strand, within Rv3133c at 3499.644 kb on - strand, within Rv3133c at 3499.665 kb on + strand, within Rv3133c at 3499.666 kb on - strand, within Rv3133c at 3499.910 kb on + strand at 3499.944 kb on + strand at 3499.945 kb on - strand at 3499.967 kb on - strand at 3499.967 kb on - strand at 3499.970 kb on + strand at 3499.989 kb on + strand at 3499.989 kb on + strand at 3499.990 kb on - strand at 3500.153 kb on + strand, within Rv3134c at 3500.153 kb on + strand, within Rv3134c at 3500.154 kb on - strand, within Rv3134c at 3500.154 kb on - strand, within Rv3134c
Per-strain Table
Position Strand Gene LocusTag Fraction 7H9 with Chlorhexidine diacetate salt 0.0021 mM remove 3,496,679 + Rv3131 0.13 -0.7 3,497,959 - Rv3132c 0.25 -1.2 3,498,755 - Rv3132c 0.71 -1.9 3,498,924 + Rv3132c 0.80 -0.5 3,499,011 - Rv3132c 0.85 +0.4 3,499,063 - Rv3132c 0.88 -0.6 3,499,365 + Rv3133c 0.16 -0.2 3,499,366 - Rv3133c 0.16 -1.0 3,499,366 - Rv3133c 0.16 +1.0 3,499,644 - Rv3133c 0.58 -0.3 3,499,665 + Rv3133c 0.62 -0.0 3,499,666 - Rv3133c 0.62 +0.4 3,499,910 + -0.5 3,499,944 + +0.4 3,499,945 - -0.2 3,499,967 - -0.1 3,499,967 - +2.6 3,499,970 + -0.4 3,499,989 + +0.0 3,499,989 + -0.1 3,499,990 - +0.0 3,500,153 + Rv3134c 0.26 -0.4 3,500,153 + Rv3134c 0.26 +0.4 3,500,154 - Rv3134c 0.26 +0.4 3,500,154 - Rv3134c 0.26 -0.4
Or see this region's nucleotide sequence