Experiment: 7H9 with Chlorhexidine diacetate salt 0.0021 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0688 and Rv0689c overlap by 4 nucleotides Rv0689c and Rv0690c are separated by 612 nucleotides Rv0690c and Rv0691c overlap by 4 nucleotides Rv0691c and Rv0691A overlap by 9 nucleotides Rv0691A and Rv0692 overlap by 16 nucleotides
Rv0688: Rv0688 - Putative ferredoxin reductase, at 787,940 to 789,160
Rv0688
Rv0689c: Rv0689c - Hypothetical protein, at 789,157 to 789,411
Rv0689c
Rv0690c: Rv0690c - Conserved hypothetical protein, at 790,024 to 791,073
Rv0690c
Rv0691c: Rv0691c - Probable transcriptional regulatory protein, at 791,070 to 791,666
Rv0691c
Rv0691A: Rv0691A - Mycofactocin precursor protein, at 791,658 to 791,846
Rv0691A
Rv0692: Rv0692 - Conserved hypothetical protein, at 791,831 to 792,160
Rv0692
Position (kb) 790
791
792 Strain fitness (log2 ratio) -2
-1
0
1
2 at 789.032 kb on + strand, within Rv0688 at 789.036 kb on - strand, within Rv0688 at 789.142 kb on - strand at 789.170 kb on - strand at 789.213 kb on + strand, within Rv0689c at 789.213 kb on + strand, within Rv0689c at 789.214 kb on - strand, within Rv0689c at 789.214 kb on - strand, within Rv0689c at 789.418 kb on + strand at 789.419 kb on - strand at 789.695 kb on + strand at 789.696 kb on - strand at 790.101 kb on + strand at 790.102 kb on - strand at 790.105 kb on + strand at 790.106 kb on - strand at 790.106 kb on - strand at 790.106 kb on - strand at 790.106 kb on - strand at 790.113 kb on - strand at 790.244 kb on + strand, within Rv0690c at 790.413 kb on - strand, within Rv0690c at 790.577 kb on + strand, within Rv0690c at 790.628 kb on - strand, within Rv0690c at 790.998 kb on - strand at 790.998 kb on - strand at 791.167 kb on + strand, within Rv0691c at 791.284 kb on + strand, within Rv0691c at 791.284 kb on + strand, within Rv0691c at 791.284 kb on + strand, within Rv0691c at 791.285 kb on - strand, within Rv0691c at 791.285 kb on - strand, within Rv0691c at 791.299 kb on + strand, within Rv0691c at 791.841 kb on + strand at 791.917 kb on - strand, within Rv0692 at 791.980 kb on + strand, within Rv0692 at 791.980 kb on + strand, within Rv0692 at 791.981 kb on - strand, within Rv0692
Per-strain Table
Position Strand Gene LocusTag Fraction 7H9 with Chlorhexidine diacetate salt 0.0021 mM remove 789,032 + Rv0688 0.89 -2.7 789,036 - Rv0688 0.90 -0.6 789,142 - +0.5 789,170 - +0.2 789,213 + Rv0689c 0.22 +0.0 789,213 + Rv0689c 0.22 -1.0 789,214 - Rv0689c 0.22 -0.4 789,214 - Rv0689c 0.22 -0.2 789,418 + -1.1 789,419 - -2.0 789,695 + +0.1 789,696 - -0.0 790,101 + +0.2 790,102 - -0.3 790,105 + -1.1 790,106 - +0.3 790,106 - -0.5 790,106 - +0.7 790,106 - +1.5 790,113 - -0.0 790,244 + Rv0690c 0.21 -1.6 790,413 - Rv0690c 0.37 -1.3 790,577 + Rv0690c 0.53 -0.2 790,628 - Rv0690c 0.58 -0.5 790,998 - -0.3 790,998 - -2.2 791,167 + Rv0691c 0.16 +0.2 791,284 + Rv0691c 0.36 +0.5 791,284 + Rv0691c 0.36 -1.4 791,284 + Rv0691c 0.36 +1.0 791,285 - Rv0691c 0.36 +1.0 791,285 - Rv0691c 0.36 +2.4 791,299 + Rv0691c 0.38 +0.4 791,841 + -0.3 791,917 - Rv0692 0.26 +0.0 791,980 + Rv0692 0.45 +0.3 791,980 + Rv0692 0.45 +1.0 791,981 - Rv0692 0.45 -1.1
Or see this region's nucleotide sequence