Experiment: 7H9 with Chlorhexidine diacetate salt 0.0021 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0534c and Rv0535 are separated by 16 nucleotides Rv0535 and Rv0536 overlap by 4 nucleotides Rv0536 and Rv0537c are separated by 9 nucleotides
Rv0534c: Rv0534c - 1,4-dihydroxy-2-naphthoate octaprenyltransferase MenA (DHNA-octaprenyltransferase), at 625,562 to 626,440
Rv0534c
Rv0535: Rv0535 - Probable 5'-methylthioadenosine phosphorylase Pnp (MTA phosphorylase), at 626,457 to 627,251
Rv0535
Rv0536: Rv0536 - Probable UDP-glucose 4-epimerase GalE3 (galactowaldenase) (UDP-galactose 4-epimerase) (uridine diphosphate galactose 4-epimerase) (uridine diphospho-galactose 4-epimerase), at 627,248 to 628,288
Rv0536
Rv0537c: Rv0537c - Probable integral membrane protein, at 628,298 to 629,731
Rv0537c
Position (kb) 627
628
629 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 626.456 kb on + strand at 626.457 kb on - strand at 626.505 kb on + strand at 626.506 kb on - strand at 626.506 kb on - strand at 626.811 kb on + strand, within Rv0535 at 626.812 kb on - strand, within Rv0535 at 626.812 kb on - strand, within Rv0535 at 626.812 kb on - strand, within Rv0535 at 627.620 kb on + strand, within Rv0536 at 627.620 kb on + strand, within Rv0536 at 627.621 kb on - strand, within Rv0536 at 627.621 kb on - strand, within Rv0536 at 627.774 kb on - strand, within Rv0536 at 627.866 kb on + strand, within Rv0536 at 627.867 kb on - strand, within Rv0536 at 628.163 kb on + strand, within Rv0536 at 628.299 kb on + strand at 628.299 kb on + strand at 628.323 kb on + strand at 628.323 kb on + strand at 628.620 kb on - strand, within Rv0537c at 628.740 kb on + strand, within Rv0537c at 628.741 kb on - strand, within Rv0537c at 628.944 kb on + strand, within Rv0537c at 629.095 kb on + strand, within Rv0537c at 629.151 kb on + strand, within Rv0537c at 629.151 kb on + strand, within Rv0537c at 629.151 kb on + strand, within Rv0537c at 629.152 kb on - strand, within Rv0537c at 629.152 kb on - strand, within Rv0537c at 629.227 kb on - strand, within Rv0537c at 629.279 kb on - strand, within Rv0537c
Per-strain Table
Position Strand Gene LocusTag Fraction 7H9 with Chlorhexidine diacetate salt 0.0021 mM remove 626,456 + -0.8 626,457 - -0.1 626,505 + +0.1 626,506 - -0.7 626,506 - -0.6 626,811 + Rv0535 0.45 -0.5 626,812 - Rv0535 0.45 +0.1 626,812 - Rv0535 0.45 -2.9 626,812 - Rv0535 0.45 +0.7 627,620 + Rv0536 0.36 +0.2 627,620 + Rv0536 0.36 -0.3 627,621 - Rv0536 0.36 +0.0 627,621 - Rv0536 0.36 +0.3 627,774 - Rv0536 0.51 +0.2 627,866 + Rv0536 0.59 +1.3 627,867 - Rv0536 0.59 +2.0 628,163 + Rv0536 0.88 +0.0 628,299 + +0.2 628,299 + -0.4 628,323 + +0.2 628,323 + -0.3 628,620 - Rv0537c 0.22 -0.4 628,740 + Rv0537c 0.31 +1.9 628,741 - Rv0537c 0.31 -0.3 628,944 + Rv0537c 0.45 +0.1 629,095 + Rv0537c 0.56 -0.6 629,151 + Rv0537c 0.59 -0.8 629,151 + Rv0537c 0.59 -0.0 629,151 + Rv0537c 0.59 +1.0 629,152 - Rv0537c 0.60 +0.3 629,152 - Rv0537c 0.60 +0.5 629,227 - Rv0537c 0.65 -0.5 629,279 - Rv0537c 0.68 -0.2
Or see this region's nucleotide sequence