Experiment: 7H9 with Tetrazolium violet 0.065 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF789 and Rv0756c are separated by 27 nucleotides Rv0756c and Rv0757 are separated by 141 nucleotides Rv0757 and Rv0758 are separated by 44 nucleotides
GFF789 - tRNA-Thr, at 850,642 to 850,713
GFF789
Rv0756c: Rv0756c - Unknown protein, at 850,741 to 851,466
Rv0756c
Rv0757: Rv0757 - Possible two component system response transcriptional positive regulator PhoP, at 851,608 to 852,351
Rv0757
Rv0758: Rv0758 - Possible two component system response sensor kinase membrane associated PhoR, at 852,396 to 853,853
Rv0758
Position (kb) 851
852
853 Strain fitness (log2 ratio) -2
-1
0
1
2 at 850.625 kb on + strand at 850.628 kb on + strand at 850.628 kb on + strand at 850.628 kb on + strand at 850.629 kb on - strand at 850.629 kb on - strand at 850.629 kb on - strand at 850.860 kb on + strand, within Rv0756c at 850.860 kb on + strand, within Rv0756c at 850.861 kb on - strand, within Rv0756c at 850.985 kb on - strand, within Rv0756c at 851.055 kb on + strand, within Rv0756c at 851.055 kb on + strand, within Rv0756c at 851.241 kb on + strand, within Rv0756c at 851.242 kb on - strand, within Rv0756c at 851.478 kb on - strand at 851.577 kb on - strand at 851.959 kb on + strand, within Rv0757 at 851.960 kb on - strand, within Rv0757 at 851.968 kb on + strand, within Rv0757 at 852.049 kb on - strand, within Rv0757 at 852.266 kb on - strand, within Rv0757 at 852.359 kb on + strand at 852.359 kb on + strand at 852.363 kb on + strand at 852.601 kb on - strand, within Rv0758 at 852.612 kb on - strand, within Rv0758 at 852.640 kb on - strand, within Rv0758 at 852.640 kb on - strand, within Rv0758 at 852.672 kb on + strand, within Rv0758 at 852.775 kb on + strand, within Rv0758
Per-strain Table
Position Strand Gene LocusTag Fraction 7H9 with Tetrazolium violet 0.065 mM remove 850,625 + -0.1 850,628 + -0.1 850,628 + +0.2 850,628 + +0.1 850,629 - -0.1 850,629 - +0.4 850,629 - -0.1 850,860 + Rv0756c 0.16 -1.9 850,860 + Rv0756c 0.16 -0.6 850,861 - Rv0756c 0.17 -0.1 850,985 - Rv0756c 0.34 -0.1 851,055 + Rv0756c 0.43 +2.1 851,055 + Rv0756c 0.43 -0.0 851,241 + Rv0756c 0.69 -1.2 851,242 - Rv0756c 0.69 +0.4 851,478 - -1.3 851,577 - +0.4 851,959 + Rv0757 0.47 +0.9 851,960 - Rv0757 0.47 -0.5 851,968 + Rv0757 0.48 -2.0 852,049 - Rv0757 0.59 -1.1 852,266 - Rv0757 0.88 -1.5 852,359 + +0.1 852,359 + +0.5 852,363 + +0.7 852,601 - Rv0758 0.14 -0.5 852,612 - Rv0758 0.15 -1.1 852,640 - Rv0758 0.17 -1.8 852,640 - Rv0758 0.17 +0.9 852,672 + Rv0758 0.19 +0.4 852,775 + Rv0758 0.26 -0.1
Or see this region's nucleotide sequence