Experiment: 7H9 with Tetrazolium violet 0.065 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0293c and Rv0294 are separated by 106 nucleotides Rv0294 and Rv0295c overlap by 12 nucleotides Rv0295c and Rv0296c are separated by 9 nucleotides
Rv0293c: Rv0293c - Conserved protein, at 356,862 to 358,064
Rv0293c
Rv0294: Rv0294 - Probable trans-aconitate methyltransferase Tam, at 358,171 to 358,956
Rv0294
Rv0295c: Rv0295c - Conserved protein, at 358,945 to 359,748
Rv0295c
Rv0296c: Rv0296c - Probable sulfatase, at 359,758 to 361,155
Rv0296c
Position (kb) 358
359 Strain fitness (log2 ratio) -2
-1
0
1
2 at 357.259 kb on + strand, within Rv0293c at 357.275 kb on + strand, within Rv0293c at 357.275 kb on + strand, within Rv0293c at 357.276 kb on - strand, within Rv0293c at 357.340 kb on + strand, within Rv0293c at 357.340 kb on + strand, within Rv0293c at 357.452 kb on - strand, within Rv0293c at 357.481 kb on + strand, within Rv0293c at 357.517 kb on + strand, within Rv0293c at 357.518 kb on - strand, within Rv0293c at 357.554 kb on + strand, within Rv0293c at 357.555 kb on - strand, within Rv0293c at 357.844 kb on - strand, within Rv0293c at 358.168 kb on + strand at 358.168 kb on + strand at 358.168 kb on + strand at 358.168 kb on + strand at 358.168 kb on + strand at 358.169 kb on - strand at 358.169 kb on - strand at 358.169 kb on - strand at 358.169 kb on - strand at 358.307 kb on - strand, within Rv0294 at 358.619 kb on + strand, within Rv0294 at 358.726 kb on + strand, within Rv0294 at 358.727 kb on - strand, within Rv0294 at 358.884 kb on + strand at 358.885 kb on - strand at 358.955 kb on - strand at 359.108 kb on - strand, within Rv0295c at 359.533 kb on - strand, within Rv0295c at 359.533 kb on - strand, within Rv0295c at 359.623 kb on - strand, within Rv0295c at 359.631 kb on - strand, within Rv0295c at 359.726 kb on + strand at 359.726 kb on + strand at 359.726 kb on + strand at 359.759 kb on + strand at 359.838 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 7H9 with Tetrazolium violet 0.065 mM remove 357,259 + Rv0293c 0.33 -0.5 357,275 + Rv0293c 0.34 -1.1 357,275 + Rv0293c 0.34 +1.0 357,276 - Rv0293c 0.34 -0.2 357,340 + Rv0293c 0.40 -0.5 357,340 + Rv0293c 0.40 -1.2 357,452 - Rv0293c 0.49 -0.5 357,481 + Rv0293c 0.51 +1.8 357,517 + Rv0293c 0.54 +1.4 357,518 - Rv0293c 0.55 -0.0 357,554 + Rv0293c 0.58 +0.3 357,555 - Rv0293c 0.58 -0.2 357,844 - Rv0293c 0.82 +0.6 358,168 + -0.4 358,168 + +0.8 358,168 + -0.5 358,168 + -0.1 358,168 + +0.1 358,169 - +0.3 358,169 - -0.2 358,169 - +0.1 358,169 - -0.3 358,307 - Rv0294 0.17 -1.8 358,619 + Rv0294 0.57 -0.4 358,726 + Rv0294 0.71 -0.4 358,727 - Rv0294 0.71 -2.3 358,884 + -1.5 358,885 - -0.1 358,955 - +0.2 359,108 - Rv0295c 0.20 -0.5 359,533 - Rv0295c 0.73 +0.8 359,533 - Rv0295c 0.73 +0.4 359,623 - Rv0295c 0.84 -0.2 359,631 - Rv0295c 0.85 +0.3 359,726 + -0.5 359,726 + -0.0 359,726 + +0.4 359,759 + -0.3 359,838 - -0.7
Or see this region's nucleotide sequence