Experiment: 7H9 with Dibucaine 0.21 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv2364c and Rv2365c are separated by 73 nucleotides Rv2365c and Rv2366c overlap by 29 nucleotides Rv2366c and Rv2367c overlap by 4 nucleotides Rv2367c and Rv2368c are separated by 3 nucleotides
Rv2364c: Rv2364c - Probable GTP-binding protein Era, at 2,645,771 to 2,646,673
Rv2364c
Rv2365c: Rv2365c - Conserved hypothetical protein, at 2,646,747 to 2,647,088
Rv2365c
Rv2366c: Rv2366c - Probable conserved transmembrane protein, at 2,647,060 to 2,648,367
Rv2366c
Rv2367c: Rv2367c - Conserved hypothetical protein, at 2,648,364 to 2,648,912
Rv2367c
Rv2368c: Rv2368c - Probable PHOH-like protein PhoH1 (phosphate starvation-inducible protein PSIH), at 2,648,916 to 2,649,974
Rv2368c
Position (kb)
2647
2648
2649 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2646.953 kb on - strand, within Rv2365c at 2647.054 kb on - strand at 2647.287 kb on - strand, within Rv2366c at 2648.091 kb on - strand, within Rv2366c at 2648.091 kb on - strand, within Rv2366c at 2648.218 kb on - strand, within Rv2366c at 2648.255 kb on - strand at 2648.255 kb on - strand at 2648.255 kb on - strand at 2648.255 kb on - strand at 2648.255 kb on - strand at 2648.355 kb on - strand at 2648.355 kb on - strand at 2648.378 kb on - strand at 2648.378 kb on - strand at 2648.432 kb on - strand, within Rv2367c at 2648.432 kb on - strand, within Rv2367c at 2648.898 kb on - strand at 2648.898 kb on - strand at 2648.992 kb on + strand at 2649.257 kb on + strand, within Rv2368c at 2649.269 kb on - strand, within Rv2368c at 2649.353 kb on - strand, within Rv2368c at 2649.353 kb on - strand, within Rv2368c at 2649.363 kb on + strand, within Rv2368c at 2649.363 kb on + strand, within Rv2368c at 2649.364 kb on - strand, within Rv2368c
Per-strain Table
Position Strand Gene LocusTag Fraction 7H9 with Dibucaine 0.21 mM remove 2,646,953 - Rv2365c 0.60 -0.3 2,647,054 - -1.4 2,647,287 - Rv2366c 0.17 -2.7 2,648,091 - Rv2366c 0.79 +0.4 2,648,091 - Rv2366c 0.79 -0.8 2,648,218 - Rv2366c 0.89 -0.4 2,648,255 - -0.3 2,648,255 - +0.2 2,648,255 - -0.0 2,648,255 - -0.6 2,648,255 - +2.8 2,648,355 - -0.9 2,648,355 - -0.4 2,648,378 - +1.8 2,648,378 - -0.8 2,648,432 - Rv2367c 0.12 -0.0 2,648,432 - Rv2367c 0.12 -1.2 2,648,898 - -0.7 2,648,898 - -1.2 2,648,992 + -0.1 2,649,257 + Rv2368c 0.32 -0.5 2,649,269 - Rv2368c 0.33 -1.0 2,649,353 - Rv2368c 0.41 +0.3 2,649,353 - Rv2368c 0.41 -1.4 2,649,363 + Rv2368c 0.42 -0.4 2,649,363 + Rv2368c 0.42 -0.0 2,649,364 - Rv2368c 0.42 -0.4
Or see this region's nucleotide sequence