Experiment: 7H9 with Doxycycline hyclate 0.0035 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0630c and Rv0631c overlap by 1 nucleotides Rv0631c and Rv0632c are separated by 276 nucleotides
Rv0630c: Rv0630c - Probable exonuclease V (beta chain) RecB (exodeoxyribonuclease V beta chain)(exodeoxyribonuclease V polypeptide) (chi-specific endonuclease), at 721,729 to 725,013
Rv0630c
Rv0631c: Rv0631c - Probable exonuclease V (gamma chain) RecC (exodeoxyribonuclease V gamma chain)(exodeoxyribonuclease V polypeptide), at 725,013 to 728,306
Rv0631c
Rv0632c: Rv0632c - Probable enoyl-CoA hydratase EchA3 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase), at 728,583 to 729,278
Rv0632c
Position (kb) 725
726
727
728
729 Strain fitness (log2 ratio) -1
0
1
2
3 at 724.097 kb on + strand, within Rv0630c at 724.098 kb on - strand, within Rv0630c at 724.490 kb on + strand, within Rv0630c at 724.535 kb on + strand, within Rv0630c at 724.536 kb on - strand, within Rv0630c at 725.315 kb on - strand at 725.503 kb on + strand, within Rv0631c at 725.852 kb on - strand, within Rv0631c at 726.588 kb on - strand, within Rv0631c at 727.160 kb on - strand, within Rv0631c at 727.160 kb on - strand, within Rv0631c at 727.316 kb on + strand, within Rv0631c at 727.316 kb on + strand, within Rv0631c at 727.861 kb on + strand, within Rv0631c at 727.862 kb on - strand, within Rv0631c at 728.360 kb on - strand at 728.360 kb on - strand at 728.360 kb on - strand at 728.540 kb on + strand at 728.585 kb on - strand at 728.908 kb on + strand, within Rv0632c at 728.909 kb on - strand, within Rv0632c at 729.020 kb on - strand, within Rv0632c at 729.257 kb on + strand at 729.260 kb on - strand at 729.260 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 7H9 with Doxycycline hyclate 0.0035 mM remove 724,097 + Rv0630c 0.72 -0.2 724,098 - Rv0630c 0.72 -0.4 724,490 + Rv0630c 0.84 +1.0 724,535 + Rv0630c 0.85 +0.6 724,536 - Rv0630c 0.85 -0.8 725,315 - -0.6 725,503 + Rv0631c 0.15 +1.3 725,852 - Rv0631c 0.25 -0.1 726,588 - Rv0631c 0.48 +2.8 727,160 - Rv0631c 0.65 +0.3 727,160 - Rv0631c 0.65 +0.2 727,316 + Rv0631c 0.70 -1.5 727,316 + Rv0631c 0.70 -0.2 727,861 + Rv0631c 0.86 +0.4 727,862 - Rv0631c 0.86 +0.4 728,360 - -0.2 728,360 - -0.4 728,360 - +0.0 728,540 + +0.2 728,585 - +1.1 728,908 + Rv0632c 0.47 -0.6 728,909 - Rv0632c 0.47 -1.1 729,020 - Rv0632c 0.63 -0.6 729,257 + -0.0 729,260 - -0.2 729,260 - +0.2
Or see this region's nucleotide sequence