Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0267 and Rv0268c are separated by 41 nucleotides Rv0268c and Rv0269c are separated by 64 nucleotides Rv0269c and Rv0270 are separated by 35 nucleotides
Rv0267: Rv0267 - Probable integral membrane nitrite extrusion protein NarU (nitrite facilitator), at 321,331 to 322,722
Rv0267
Rv0268c: Rv0268c - Hypothetical protein, at 322,764 to 323,273
Rv0268c
Rv0269c: Rv0269c - Conserved hypothetical protein, at 323,338 to 324,531
Rv0269c
Rv0270: Rv0270 - Probable fatty-acid-CoA ligase FadD2 (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase), at 324,567 to 326,249
Rv0270
Position (kb) 323
324
325 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 322.399 kb on + strand, within Rv0267 at 322.586 kb on - strand at 322.614 kb on + strand at 322.615 kb on - strand at 322.676 kb on - strand at 322.681 kb on + strand at 322.690 kb on - strand at 322.720 kb on + strand at 322.721 kb on - strand at 322.721 kb on - strand at 322.725 kb on - strand at 322.878 kb on + strand, within Rv0268c at 322.879 kb on - strand, within Rv0268c at 322.888 kb on + strand, within Rv0268c at 322.977 kb on + strand, within Rv0268c at 322.997 kb on + strand, within Rv0268c at 322.997 kb on + strand, within Rv0268c at 322.997 kb on + strand, within Rv0268c at 322.997 kb on + strand, within Rv0268c at 322.998 kb on - strand, within Rv0268c at 322.998 kb on - strand, within Rv0268c at 323.000 kb on + strand, within Rv0268c at 323.001 kb on - strand, within Rv0268c at 323.001 kb on - strand, within Rv0268c at 323.008 kb on - strand, within Rv0268c at 323.026 kb on - strand, within Rv0268c at 323.026 kb on - strand, within Rv0268c at 323.026 kb on - strand, within Rv0268c at 323.088 kb on + strand, within Rv0268c at 323.089 kb on - strand, within Rv0268c at 323.100 kb on + strand, within Rv0268c at 323.101 kb on - strand, within Rv0268c at 323.101 kb on - strand, within Rv0268c at 323.101 kb on - strand, within Rv0268c at 323.121 kb on + strand, within Rv0268c at 323.121 kb on + strand, within Rv0268c at 323.239 kb on - strand at 323.239 kb on - strand at 323.281 kb on - strand at 323.290 kb on + strand at 323.290 kb on + strand at 323.291 kb on - strand at 323.307 kb on + strand at 323.307 kb on + strand at 323.308 kb on - strand at 323.308 kb on - strand at 323.308 kb on - strand at 323.308 kb on - strand at 323.308 kb on - strand at 323.310 kb on + strand at 323.310 kb on + strand at 323.310 kb on + strand at 323.310 kb on + strand at 323.310 kb on + strand at 323.310 kb on + strand at 323.311 kb on - strand at 323.311 kb on - strand at 323.311 kb on - strand at 323.311 kb on - strand at 323.312 kb on + strand at 323.313 kb on - strand at 323.313 kb on - strand at 323.313 kb on - strand at 323.357 kb on + strand at 323.358 kb on - strand at 323.523 kb on - strand, within Rv0269c at 323.979 kb on - strand, within Rv0269c at 324.248 kb on + strand, within Rv0269c at 324.248 kb on + strand, within Rv0269c at 324.398 kb on + strand, within Rv0269c at 324.399 kb on - strand, within Rv0269c at 324.401 kb on + strand, within Rv0269c at 324.425 kb on + strand at 324.425 kb on + strand at 324.534 kb on + strand at 324.556 kb on - strand at 324.556 kb on - strand at 324.573 kb on - strand at 324.630 kb on + strand at 324.630 kb on + strand at 324.630 kb on + strand at 324.661 kb on - strand at 324.714 kb on + strand at 324.715 kb on - strand at 324.875 kb on - strand, within Rv0270 at 324.875 kb on - strand, within Rv0270 at 324.952 kb on - strand, within Rv0270 at 325.056 kb on + strand, within Rv0270 at 325.057 kb on - strand, within Rv0270 at 325.068 kb on + strand, within Rv0270 at 325.069 kb on - strand, within Rv0270 at 325.507 kb on + strand, within Rv0270 at 325.508 kb on - strand, within Rv0270 at 325.508 kb on - strand, within Rv0270 at 325.508 kb on - strand, within Rv0270
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 322,399 + Rv0267 0.77 -0.6 322,586 - +0.1 322,614 + -0.1 322,615 - -0.6 322,676 - -0.2 322,681 + -0.1 322,690 - +0.8 322,720 + +1.4 322,721 - +2.8 322,721 - -1.6 322,725 - +0.3 322,878 + Rv0268c 0.22 -0.3 322,879 - Rv0268c 0.23 -0.2 322,888 + Rv0268c 0.24 +0.2 322,977 + Rv0268c 0.42 -0.1 322,997 + Rv0268c 0.46 +0.2 322,997 + Rv0268c 0.46 -0.2 322,997 + Rv0268c 0.46 +0.5 322,997 + Rv0268c 0.46 +0.2 322,998 - Rv0268c 0.46 +0.3 322,998 - Rv0268c 0.46 -2.5 323,000 + Rv0268c 0.46 -0.1 323,001 - Rv0268c 0.46 -0.3 323,001 - Rv0268c 0.46 +0.9 323,008 - Rv0268c 0.48 -1.0 323,026 - Rv0268c 0.51 +1.8 323,026 - Rv0268c 0.51 +0.0 323,026 - Rv0268c 0.51 -1.4 323,088 + Rv0268c 0.64 -0.7 323,089 - Rv0268c 0.64 +0.2 323,100 + Rv0268c 0.66 -1.1 323,101 - Rv0268c 0.66 -0.3 323,101 - Rv0268c 0.66 -0.8 323,101 - Rv0268c 0.66 -2.1 323,121 + Rv0268c 0.70 -0.1 323,121 + Rv0268c 0.70 -0.2 323,239 - +0.0 323,239 - -0.4 323,281 - -0.2 323,290 + +0.1 323,290 + -0.5 323,291 - -0.1 323,307 + +0.9 323,307 + -1.2 323,308 - -0.3 323,308 - -0.5 323,308 - -0.7 323,308 - -0.4 323,308 - -0.5 323,310 + +0.4 323,310 + -0.3 323,310 + -1.0 323,310 + -0.2 323,310 + -1.2 323,310 + -0.3 323,311 - -0.0 323,311 - -0.2 323,311 - +0.8 323,311 - -0.1 323,312 + -0.6 323,313 - -0.7 323,313 - +0.4 323,313 - -0.2 323,357 + +0.0 323,358 - +0.4 323,523 - Rv0269c 0.15 -0.0 323,979 - Rv0269c 0.54 +0.7 324,248 + Rv0269c 0.76 -1.0 324,248 + Rv0269c 0.76 +0.2 324,398 + Rv0269c 0.89 -0.1 324,399 - Rv0269c 0.89 +0.8 324,401 + Rv0269c 0.89 +1.1 324,425 + -0.4 324,425 + -0.4 324,534 + +1.3 324,556 - +3.8 324,556 - -0.0 324,573 - -0.6 324,630 + -0.7 324,630 + -0.6 324,630 + +1.0 324,661 - +0.3 324,714 + +0.4 324,715 - +0.2 324,875 - Rv0270 0.18 +0.2 324,875 - Rv0270 0.18 -0.1 324,952 - Rv0270 0.23 -0.3 325,056 + Rv0270 0.29 +0.3 325,057 - Rv0270 0.29 +0.7 325,068 + Rv0270 0.30 -2.6 325,069 - Rv0270 0.30 +0.0 325,507 + Rv0270 0.56 -0.4 325,508 - Rv0270 0.56 +0.1 325,508 - Rv0270 0.56 -1.8 325,508 - Rv0270 0.56 -0.2
Or see this region's nucleotide sequence