Experiment: cholesterol 100uM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0371c and Rv0372c overlap by 4 nucleotides Rv0372c and Rv0373c are separated by 18 nucleotides Rv0373c and Rv0374c overlap by 4 nucleotides Rv0374c and Rv0375c are separated by 14 nucleotides
Rv0371c: Rv0371c - Conserved hypothetical protein, at 448,040 to 448,633
Rv0371c
Rv0372c: Rv0372c - Conserved hypothetical protein, at 448,630 to 449,385
Rv0372c
Rv0373c: Rv0373c - Probable carbon monoxyde dehydrogenase (large chain), at 449,404 to 451,803
Rv0373c
Rv0374c: Rv0374c - Probable carbon monoxyde dehydrogenase (small chain), at 451,800 to 452,279
Rv0374c
Rv0375c: Rv0375c - Probable carbon monoxyde dehydrogenase (medium chain), at 452,294 to 453,154
Rv0375c
Position (kb) 449
450
451
452 Strain fitness (log2 ratio) -1
0
1 at 449.405 kb on + strand at 449.646 kb on - strand, within Rv0373c at 449.862 kb on - strand, within Rv0373c at 449.867 kb on + strand, within Rv0373c at 449.868 kb on - strand, within Rv0373c at 450.140 kb on + strand, within Rv0373c at 450.141 kb on - strand, within Rv0373c at 450.720 kb on - strand, within Rv0373c at 450.738 kb on - strand, within Rv0373c at 450.884 kb on + strand, within Rv0373c at 450.983 kb on + strand, within Rv0373c at 451.199 kb on + strand, within Rv0373c at 451.492 kb on + strand, within Rv0373c at 451.492 kb on + strand, within Rv0373c at 451.864 kb on + strand, within Rv0374c at 451.955 kb on + strand, within Rv0374c at 452.386 kb on - strand, within Rv0375c at 452.386 kb on - strand, within Rv0375c
Per-strain Table
Position Strand Gene LocusTag Fraction cholesterol 100uM (C) remove 449,405 + +0.1 449,646 - Rv0373c 0.10 -0.2 449,862 - Rv0373c 0.19 +0.4 449,867 + Rv0373c 0.19 -0.9 449,868 - Rv0373c 0.19 -0.7 450,140 + Rv0373c 0.31 +0.3 450,141 - Rv0373c 0.31 -0.2 450,720 - Rv0373c 0.55 +0.3 450,738 - Rv0373c 0.56 +0.3 450,884 + Rv0373c 0.62 -0.7 450,983 + Rv0373c 0.66 -0.0 451,199 + Rv0373c 0.75 -0.7 451,492 + Rv0373c 0.87 -0.1 451,492 + Rv0373c 0.87 -0.2 451,864 + Rv0374c 0.13 -1.3 451,955 + Rv0374c 0.32 -0.1 452,386 - Rv0375c 0.11 -0.0 452,386 - Rv0375c 0.11 -0.2
Or see this region's nucleotide sequence